Gene Lferr_2879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2879 
Symbol 
ID6878883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2861803 
End bp2862279 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID642790732 
Producthydrogenase maturation protease 
Protein accessionYP_002221270 
Protein GI198284949 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.980378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCA TACTGGTTCT GGGGCTGGGC AATGTCCTGC AAGGAGACGA TGGGGTGGGT 
GTGCACATCG TCCGCTGGCT CGCCGGACAG GCACCCATGA CCGGCGTCAC GATCCTGGAT
GGGGGCACGA TCGGCGCGTC GCTGCTGGTT GAACTGGAGG GAGTGGATGC TTTGCTGGTG
GCGGATGCCG TGGAATCGGG ACGAGAGGCG GGGCAAGTAA CCCTCTTCCA GGGAGAAGCG
ATGGACCGGC TCCTGACCCG TCCCAGGGCC GGCAGCGTTC ACGAAGCGGG TCTGGCCGAA
TTGCTGGACA TGGCGCGTCT GCTGGGTTGT CTTCCGGCCC GACGGGCCTT GCTCGGCATT
CAGCCCCAGA CCATCGCCTG GGGCGACGCC CTGAGTCCGC CGCTGGCCCG GTCCCTGCCC
GAAGCAGGGT ATCGCGCGCG AGCGCTCCTG GAGGAATGGC GACGTGAAGA TGCTTGA
 
Protein sequence
MGSILVLGLG NVLQGDDGVG VHIVRWLAGQ APMTGVTILD GGTIGASLLV ELEGVDALLV 
ADAVESGREA GQVTLFQGEA MDRLLTRPRA GSVHEAGLAE LLDMARLLGC LPARRALLGI
QPQTIAWGDA LSPPLARSLP EAGYRARALL EEWRREDA