| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2872 |
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| Symbol | |
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| ID | 6878876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2855765 |
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| End bp | 2856502 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642790725 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_002221263 |
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| Protein GI | 198284942 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000541059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGAAG GCGGTAAAAT CCTGCTGGTC GACGACGACC CCCGACTGCG CACCATGCTG
GTGCGCTACC TGGAAGGGCA GGGTTTCATC GTCCACGCCG CCGCCTCCGG TGTGCAGATG
GATCGCCAGT TGGAGCGGGA ATACTATGAC CTGCTCCTGC TGGATGTCCT TATGCCCGGC
GAAGACGGCT TCAGCATCTG TCAGCGTCTG CGGGTGCAGG AACCACATTT GCCCATCATC
ATGCTGACTG CCCGGGGGGA CTTGGCCGAC CGGGTACAGG GCCTCGATGT GGGCGCCGAT
GACTATCTCT CCAAGCCCTT TGAGCCCCAG GAACTGGTTG CACGTATCCG CGCCGTGCTG
CGCCGCAGTC AGGATCTGCG CAGCAGCGAC CCAACCCCGG GCGCCATCAT TTTCGGCCCC
TTCCGCCTCG CTCTCGATAG TCGCAGTCTC TGGCGGAATG ACGAGAAAAT CTCCCTTACC
GACAGCGAGT TTTCCATTCT GCACGCGCTG GCCAGTCATC CCTGGCAGCC GCTCTCGCGG
GACCGCCTGC TGGCCATGAC CCATGGCAAT GAGGACGCCA CACCCAGTTC ACGGGGTATT
GATGTGTTTA TCTCGCGCTT GCGGCGCCTT GTTGAAGACG ATCCCGGCGA ACCACACTAT
ATTCAGACCG TCTGGGGGCG GGGGTATGTG CTGGTGCCCG ATGGCGGAGA TGCCACACCC
AGGGAAGAAG GCACTTAA
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| Protein sequence | MTEGGKILLV DDDPRLRTML VRYLEGQGFI VHAAASGVQM DRQLEREYYD LLLLDVLMPG
EDGFSICQRL RVQEPHLPII MLTARGDLAD RVQGLDVGAD DYLSKPFEPQ ELVARIRAVL
RRSQDLRSSD PTPGAIIFGP FRLALDSRSL WRNDEKISLT DSEFSILHAL ASHPWQPLSR
DRLLAMTHGN EDATPSSRGI DVFISRLRRL VEDDPGEPHY IQTVWGRGYV LVPDGGDATP
REEGT
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