Gene Lferr_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2865 
Symbol 
ID6878869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2849915 
End bp2850358 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID642790719 
Productprotein of unknown function DUF188 
Protein accessionYP_002221257 
Protein GI198284936 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCT GGGTTGATGC CGACGCTTGT CCCAACGTCA TTAAAGACAT TTTGTATCGC 
GCCAGCGATC GTCTGAAACT GCCCTTGACC CTGGTAGCCA ATCAAGCTCT GCGCGTACAC
CGCTCCGCCT ATATCCGCAC TGTGGTCGTG CCGAGGGGCT TTGATGTGGC CGATGAGGAA
ATCGTTCGGC ACATCGTAGC GGGTGATCTG GTAATCACCG CCGATATTCC GCTGGCCGCC
GCCGTGCTAG AAAAAAACAG CCATGCCCTC AGCCCGCGCG GGGAGCGTTA TTCCCCCGAA
ACCATTCACG AGCGCCTGCG GATTCGTGAC ATGATGGAGC AACTCCGGGA CTCCGGCGTG
CGCACTGGTG GCCCCGCTGC CCTGAGCCAA GCGGACCGCC AGGCATTTGC GAATGCACTG
GACCAGCTAC TGGTCCGCGC ATGA
 
Protein sequence
MHIWVDADAC PNVIKDILYR ASDRLKLPLT LVANQALRVH RSAYIRTVVV PRGFDVADEE 
IVRHIVAGDL VITADIPLAA AVLEKNSHAL SPRGERYSPE TIHERLRIRD MMEQLRDSGV
RTGGPAALSQ ADRQAFANAL DQLLVRA