Gene Lferr_2859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2859 
Symbol 
ID6878863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2840922 
End bp2842460 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content63% 
IMG OID642790713 
Productprotein of unknown function DUF195 
Protein accessionYP_002221251 
Protein GI198284930 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTGGG AAAACCTGTT CTACCTCATT ATCGGTGTCG TGCTCGGTCT GATGGTCGCC 
GGACTGGTAG CGCGCAGCAT GATCCAGCGT CAGCAGGATA TCAGCGCGGC ACTCCGGGAA
GGACAGCAGG CCAGCGCAGC CCGGACGGAG AGCCTGCAGC ACGAAATAAA TGCTCTGCGG
CAACAGGCTC GGGAACAGCA GGAAATCCTC CGCCACGAGA GTGAAAGCAG GGCCGCTGCA
GAAGCGGAAA GCCGTCGTAT CCCGGCGCTG GAAAATGCCT TGGTGGCGGA ACGCGGCAAT
ACCGCGCGCC TGCAAACGGA AAACAGCGCC ATTCGGGGTC AGCTGGCAGA ACTGGGTGAG
CGGCTGGAAC AGGAGCGTCT GCGTGGTACA GAGAAGCTGG CGCTGCTGGA AGATGCCCGT
CAACGTCTCG GCGACGCCTT CCAGTCCCTG TCCGCAGAGG CCCTGCGCCG CAACAACCAG
TCCTTCCTGG AGCTGGCGCG GGAGAATCTG GAGCGTTTCC AGGAAAGCGC GAAAACCGAC
TGGGAGGGCC GACAAAAGGC TGTAGGGCAA CTGGTGGAGC CTATCCGTGA GTCCCTGGAG
AAGGTGGGCA CCCGCATCGA TGCCATGGAG AAGACCCGCA TCGATGCCTA CGGCGCCCTC
AATGAGCAGA TCCGTGGTCT CGTCCAGGAC CACCTGCCGC GCCTGCATCA GGAAACCGCG
GCGCTGGTGA AGGCCCTGCG CCAGCCCGCG GCCCGGGGGC GCTGGGGCGA AATGCAGCTC
AAGCGGGTCG TGGAGATGGC CGGGATGCTG GCTTACTGCG ACTTTACGGA GCAGGAGGGA
GTCAATACCG ATTCGGGTCA GCAGCGTCCC GATCTGCTGG TGCGCCTGCC CGGCGGCAAA
CGCATCGTCG TCGATGCCAA GGCGCCACTG AGTGCTTATC TGGAGGCCAT GGAAACCGAT
GATGAGCAGA AACGCGCACA TTTTCTGCAC AAGCATGCCA GCGAACTGCG CACCCACATG
ACCCAGCTCA GCAAAAAATC CTACTGGGAA CAGTTCCAGC CGACCCCGGA GTTCGTTGTC
CTGTTCGTGC CCGGTGAGGT GTTCTTCAGC GCTGCCCTCC AGGAAGACCC GTCGCTCATC
GAATACGGCG TCGAGCAAAA GGTGATCGTT GCCAGCCCCA CCACCCTCAT CGCCCTGCTG
CGGGCGGTGG CCTATGGCTG GCGGCAGGAA TCGCTGGCTG AAAATGCCCG TGCCATCAGC
GATCTCGGCA AAGAGCTTTA CGATCGTATC AGCATTTTGG CAGGGCACTG GGCGCGGGTG
GGCAAGGGGC TGGGGCAGGC GGTGGAGGCC TACAACAGCG CGACGGGGTC GCTGGAAAGC
CGGGTACTGG TCTCCGCGCG CAAGTTCCGC GACCTCAAGG CTACGCCCGA GGCAAGGGAA
CTACCCGGCA TGGACCCCGT GGAACGGGTC CCGCGCCTCC TTCAGGCTGA AGAATTCATC
GGACCGGAGG CCACAGCCCC GCTTGCGGAC CAACGCTAG
 
Protein sequence
MIWENLFYLI IGVVLGLMVA GLVARSMIQR QQDISAALRE GQQASAARTE SLQHEINALR 
QQAREQQEIL RHESESRAAA EAESRRIPAL ENALVAERGN TARLQTENSA IRGQLAELGE
RLEQERLRGT EKLALLEDAR QRLGDAFQSL SAEALRRNNQ SFLELARENL ERFQESAKTD
WEGRQKAVGQ LVEPIRESLE KVGTRIDAME KTRIDAYGAL NEQIRGLVQD HLPRLHQETA
ALVKALRQPA ARGRWGEMQL KRVVEMAGML AYCDFTEQEG VNTDSGQQRP DLLVRLPGGK
RIVVDAKAPL SAYLEAMETD DEQKRAHFLH KHASELRTHM TQLSKKSYWE QFQPTPEFVV
LFVPGEVFFS AALQEDPSLI EYGVEQKVIV ASPTTLIALL RAVAYGWRQE SLAENARAIS
DLGKELYDRI SILAGHWARV GKGLGQAVEA YNSATGSLES RVLVSARKFR DLKATPEARE
LPGMDPVERV PRLLQAEEFI GPEATAPLAD QR