| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2857 |
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| Symbol | |
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| ID | 6878861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2839119 |
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| End bp | 2839844 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642790711 |
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| Product | protein of unknown function DUF558 |
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| Protein accession | YP_002221249 |
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| Protein GI | 198284928 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCA TTCACTTATA CGCCGATTCC GACCTGCCCG AAAGCGGCCC CTTTTTGCTG
CCGGCAGGTG CCAGCCATCA TCTGCTCAAG GTGTTGCGCG CCCGCCATGG CCAGGAGCTG
ACCCTGTTCA ATGGCGATGG CTGGATGTAT CAGGCGTCCC TGACCGGGAT TTCGGGGGCG
CAAGCGCAGT TGGCGATCCG GGGGCGGCAA CCGCGATCGA CCGGTTCGCC GCTGGCTATT
CAGGTGTTTT TGCCACTGAC GCGCGGCGAG CGCTGGGACT GGAGCCTACA GAAGGCAGTG
GAGCTGGGGG TGCGGTGGAT TCAGCCGGTG GCCTGCCGCC ACGGAGTGGT GCAACTGAGT
GAAGCACGCG GGGAGAAACG TCTGGCGCGC TGGCGGGATA TCGTCATTGC GGCCTGCGAG
CAAAGCGGCA GCACGACGAT TCCCGAACTC GCTCCGCCGG TTGCGCTGGA AACCGCATGG
GCGGGTGTGC GGGGAGCCGC CTTCGTACTC GACCCGGAGG GTGGGCAGCG CTTTACCGAT
CTTGGCCATC CGGGGCCGGA GATCACCCTG CTCAGTGGCC CCGAGGGTGG GCTGGCAGCA
GAAGAGGTAG CCGCCGCGCA GGCCCACGGC TTTCGCTCGT TGCGCATGGG ACCGCGCATC
CTGCGCGCGG AGACTGCCGC CATTGCCGCT ATCGCCGTCG CCCAGGCGCT GTGGGGCGAT
CTCTGA
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| Protein sequence | MPRIHLYADS DLPESGPFLL PAGASHHLLK VLRARHGQEL TLFNGDGWMY QASLTGISGA
QAQLAIRGRQ PRSTGSPLAI QVFLPLTRGE RWDWSLQKAV ELGVRWIQPV ACRHGVVQLS
EARGEKRLAR WRDIVIAACE QSGSTTIPEL APPVALETAW AGVRGAAFVL DPEGGQRFTD
LGHPGPEITL LSGPEGGLAA EEVAAAQAHG FRSLRMGPRI LRAETAAIAA IAVAQALWGD
L
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