| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2853 |
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| Symbol | |
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| ID | 6878857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2834737 |
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| End bp | 2836734 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642790707 |
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| Product | transketolase |
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| Protein accession | YP_002221245 |
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| Protein GI | 198284924 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGA CCCGTACTGA TCTGGCGAAC GCCATCCGCG TTCTCACCAT GGACGCCGTG
GAAAAGGCAA AATCCGGCCA TCCCGGCATG CCCATGGGCA TGGCGGACAT CGCCGAAGTG
CTGTGGAACG ACTTTCTGGT CCACAACCCC GCCAATACCC ATTGGGCCAA CCGCGACCGC
TTCATTCTGT CCAATGGACA CGGCTCCCTC CTGCAGTACG CGCTCCTCCA TCTCACCGGC
TACGATGTCT CCATGGAAGA CCTCAAAAAC TTCCGTCAGT GGCACAGCAA GACCCCCGGT
CATCCGGAGT ACCGCGACAC TCCAGGCATT GAAACCACCA CTGGCCCCCT GGGTCAGGGC
CTTGCCAACG GTGTCGGAAT GGCGCTGGCG GAGCGTATGC TGGCCAGTCA CTTCAACCGC
CCCGATCATG AAATCATCCA TCACTACACG TATGTATTCC TCGGTGACGG CTGCCTCATG
GAAGGCATTT CTCATGAGGC CTGTTCCCTG GCGGGCGTCT GGGGGCTGGG CAAGCTCATC
TGTTTCTACG ATGACAACAA CATCTCCATT GACGGTCATG TGGGTGACTG GTTCGCCGAC
AACACCCCGG CGCGTTTCGA GGCTTACGGC TGGCATGTGA TCCGTCACGT CGACGGACAT
GACCCCGAAG CCATCAAAAT GGCCATCGTG GACGCCCGCA AGCAGACCGA CAAGCCCACC
CTGATCTGCT GCAAAACCGT CATCGGCCAC GGCTCCCCCA ACAAGGCCGG CAGCCATGAC
TGTCATGGCG CGCCTCTGGG TGCCGAAGAA GTCTGCCTGA CCCGGGAAAA CCTGGGCTGG
TCCGCGGAGC CGTTCCAGAT CCCCGAGGCC GTCTACCGCG CCTATGATGC CCGGGCCAAA
GGAGAGGCCG CGGAGGCCGA CTGGAAGGCC CGTTTCGCCA AATACCGGGA ACTCTATCCC
GAAGAGGCGG CGGAGCTCGA GCGGCGCCTG GCCGGCACCC CCGCCAGCGA TTTCGATGCG
GCGGTGGCGG TGCTCATCGC CGATTTCCGT AAGACGGCGC CCAAAATCGC TACCCGCGTG
GCATCCGGTC AGTGCATTCA GGCCCTTGCA CCGAAGTTGC CCGAATTTAT CGGTGGTTCC
GCCGACCTGA CGCCTTCCAA CAACACGCGC TGGAAGGAAG CCATCGACAT CGGCCCCCAT
CGCCTGATGG GCAACTACAT CCACTACGGC GTGCGGGAAT TCGGCATGTC CGCCATCATG
AACGGCGTCG CTCTCTACGG CGGTTTCCTG CCCTTCGGCG GCACCTTCCT GATTTTCTCC
GACTACAGCC GCAATGCGAT CCGGATGTCG GCGCTGATGG GTATTCGCGT GATCTATGTG
ATGACCCATG ACTCCATCGG TCTCGGCGAA GACGGCCCCA CTCACCAGCC CATCGAGCAG
GTCAACAGCC TGCGTCTGAT CCCCAACCTC CATGTCTGGC GCCCGGCGGA TGCCGTGGAA
ACCGCCATCG CCTGGGAATC CTCGGTCAAA CTGGAGCGGA CGCCGTCCCT GCTGGCCCTC
AGCCGGCAGA ACCTCCCGGC GCTGCCCCAC ACCGACGAGA CCGTGGCCAA TGCCCGGCGC
GGCGGCTATG TGCTCAAGGA GGCCGCAAAC GGCAAGGCCG AGGGTATCCT GATCGCCACC
GGCTCCGAAG TGGAGCTGGC GCTGGCGGCC CAGGCCAAAC TGGCGGAGCA GGGACATCAC
GTGCGCGTGG TTTCCATGCC GTGCATGAAT ATCTTTGCGG CGCAGGACGC GGCGTATCAG
GAACGTGTCC TGCCAAGCAG CATCACCAAG CGTGTGGCCA TCGAAGCGGG CACCACGGGG
CTCTGGTACC GGTATGTGGG TCTGCACGGC GCGGTCATCG GCATCGACCA CTTTGGCGCC
TCGGCCCCGG CCCCGGTCCT GTTCGAGAAG TTCGGCTTTA CGGCGGATAA CGTCGTCGCG
CACTTCCAGG CACTGTAA
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| Protein sequence | MTVTRTDLAN AIRVLTMDAV EKAKSGHPGM PMGMADIAEV LWNDFLVHNP ANTHWANRDR
FILSNGHGSL LQYALLHLTG YDVSMEDLKN FRQWHSKTPG HPEYRDTPGI ETTTGPLGQG
LANGVGMALA ERMLASHFNR PDHEIIHHYT YVFLGDGCLM EGISHEACSL AGVWGLGKLI
CFYDDNNISI DGHVGDWFAD NTPARFEAYG WHVIRHVDGH DPEAIKMAIV DARKQTDKPT
LICCKTVIGH GSPNKAGSHD CHGAPLGAEE VCLTRENLGW SAEPFQIPEA VYRAYDARAK
GEAAEADWKA RFAKYRELYP EEAAELERRL AGTPASDFDA AVAVLIADFR KTAPKIATRV
ASGQCIQALA PKLPEFIGGS ADLTPSNNTR WKEAIDIGPH RLMGNYIHYG VREFGMSAIM
NGVALYGGFL PFGGTFLIFS DYSRNAIRMS ALMGIRVIYV MTHDSIGLGE DGPTHQPIEQ
VNSLRLIPNL HVWRPADAVE TAIAWESSVK LERTPSLLAL SRQNLPALPH TDETVANARR
GGYVLKEAAN GKAEGILIAT GSEVELALAA QAKLAEQGHH VRVVSMPCMN IFAAQDAAYQ
ERVLPSSITK RVAIEAGTTG LWYRYVGLHG AVIGIDHFGA SAPAPVLFEK FGFTADNVVA
HFQAL
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