| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2848 |
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| Symbol | |
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| ID | 6878852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2829125 |
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| End bp | 2829787 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642790702 |
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| Product | Ribulose-phosphate 3-epimerase |
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| Protein accession | YP_002221240 |
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| Protein GI | 198284919 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.19951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGT TCAAGATTTC CCCCTCCATC CTTTCGGCGG ATTTTGCCCG TCTGGGTGAG
GAAGTGCGCG CCGTCGATGA GGCGGGTGCC GACTATATCC ATATCGACGT CATGGACAAC
CATTTCGTCC CCAATCTGAC CATCGGACCG CTGGTGGCGG CCGCCATCAA GCCCCACACC
CAAAAGCCGC TGGATGTCCA CCTCATGATC TCACCGGTGG ACAGCATCAT TCCCGATTTC
GCCAAGGCCG GCGCCGATAT CATTACCGTG CATCCCGAAG CGACGATCCA TCTGGACCGT
ACTATTCAGT TGATCCACAG CCTGGGCTGT AAGGCTGGCG TTTCCCTCAA TCCTTCCACG
CCCCTCGATG TGCTGGACTA TGTCCTGGAG AGTCTTGACC TGGTGCTGGT GATGAGCGTC
AACCCCGGTT TCGGCGGGCA GAGCTTTATC GAGTACACCC TGCGCAAGAT CGAGGCGATC
CGCAAGCGCA TCGAGGCGAC CGGCAAGGCT ATCGAACTGG AAGTGGATGG TGGCGTCAAG
GTGGACAATG TGCGGCGGGT CGCCGATGCC GGCGCCGATG TCTTCGTGGC GGGCAGCGCC
ATCTATAACA CCCCCGACTA CGCCGCGACC ATTGCCGCTT TCCGCAAAGC CCTGGCGGGC
TGA
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| Protein sequence | MTQFKISPSI LSADFARLGE EVRAVDEAGA DYIHIDVMDN HFVPNLTIGP LVAAAIKPHT
QKPLDVHLMI SPVDSIIPDF AKAGADIITV HPEATIHLDR TIQLIHSLGC KAGVSLNPST
PLDVLDYVLE SLDLVLVMSV NPGFGGQSFI EYTLRKIEAI RKRIEATGKA IELEVDGGVK
VDNVRRVADA GADVFVAGSA IYNTPDYAAT IAAFRKALAG
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