Gene Lferr_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2843 
Symbol 
ID6878847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2824446 
End bp2825237 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID642790697 
ProductIndole-3-glycerol-phosphate synthase 
Protein accessionYP_002221235 
Protein GI198284914 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00184612 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TACTTCAGGA AATCATTGCC CATAAGCGGG AGGAGCTGGT GGAGCGCCAA 
ACCCGTCTGG GCCTTGCGGA GCTGCAGGCG GCAGTGGCCC TGACGGCACC GCCGCGCAAC
TTCGTCGGCG CCGTTCGCGC CAGAATGGCC CAGGGACAGC CCGCAGTGAT CGCCGAAATC
AAAAAGGCAT CGCCGTCGGC GGGGGTAATC CGCGAAGACT TCAATCCGGT GACCATTGCC
CAAGACTACG CCGCCCATGG CGCAGCCTGC CTGTCGGTTC TGACCGATGA ACACTATTTT
CAGGGCGCCG ACCTCTATCT CGCCGCCGCC CGTGAGGCCT GCCCACTGCC CGTGCTACGC
AAGGATTTCT GCATCGATCC CTATCAGGTC TGGGAAGCAC GGGCCATTGG GGCCGACGCC
ATCCTGCTCA TCGTTGCGGC CCTGAGCGAT GCCGAGCTGC AGAGTCTGGA GGCAACGGCG
CAGAGCCTGG ATCTGGCGGT GCTGGTGGAG GTGCATGATG CAGCCGAGTT ACAGCGCGCA
CTAAAATTGC GTACCCCACT GATCGGCATC AATAACCGGG ATCTGCGGCG TTTTGTCACC
GAAATTGAAA CCACGCTGAA ACTGCTCCCC GAGATTCCCC GAGAGCGGAT CGTCGTCACC
GAAAGCGGCA TCCGCAGCCG GGAGGAGGTG GCCACCCTGC GCGCCGCGGG AGTCGGTGCC
TTTCTCGTGG GCGAGGCATT TATGCGCACC GCCCAGCCGG GAGACGCCCT GCAACACCTG
TTTTTTGACT AA
 
Protein sequence
MTDILQEIIA HKREELVERQ TRLGLAELQA AVALTAPPRN FVGAVRARMA QGQPAVIAEI 
KKASPSAGVI REDFNPVTIA QDYAAHGAAC LSVLTDEHYF QGADLYLAAA REACPLPVLR
KDFCIDPYQV WEARAIGADA ILLIVAALSD AELQSLEATA QSLDLAVLVE VHDAAELQRA
LKLRTPLIGI NNRDLRRFVT EIETTLKLLP EIPRERIVVT ESGIRSREEV ATLRAAGVGA
FLVGEAFMRT AQPGDALQHL FFD