| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2838 |
|---|
| Symbol | |
|---|
| ID | 6878842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2821702 |
|---|
| End bp | 2822430 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642790692 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002221230 |
|---|
| Protein GI | 198284909 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0121852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCCA TCGATCGAAG TCATCTCTAT GATGGTGGTG AACTCGCTAG CCCGGAATGT
GTGGGCGAGC GGGTCATCAT TCCGGGTCCC GCGGGTGATC TGGAGGGTGT CACAGCTTGC
CCCGACAAAG AGACACGCGG TGCGGTGGCG GTCATTCTCC ATCCGCACCC CCTTTACGGC
GGTACCTTGA ACAACAAGGT CGTGTATTAT CTCAGCAAAA CCTGCAATCA GCTGGGCGTC
CCGTCGTTGC GCTTCAATTT TCGCGGGGTG GGCGGGAGTA CGGGCGTCTA TGATGATGGC
CGTGGTGAAA CCGAGGATTG CCTGGCGGTG CTCGACTGGG TGCAGGAGCG CCGCCCCGGC
TTCGATATCT GGCTCGCCGG ATTTTCCTTC GGAGCGTATG TGGCCTACCG CAGCGTGCAC
CGCCATCCAC GTATCAGCCG TCTTCTGACC GTCGCCCCGC CCGTCAATCT CTTTGATTTC
ACGGTGCTGC CAGCACCTTC CTGCCCGTGG ACCCTGATTC AGGGCGAACT GGACGAACTG
GTACCCGCCA CGAGCGTAGA AAACTGGGTT GATACACTGC CCGTCCGGCC CAGGCAAATT
TTGCTTCCCG CAGACCACTT CTTTCATGGT CAGCTCAATG CGCTGCAAGG GGCACTGTTG
GCGTCCCTCA GTGAAGAAGT AAGCGAGATG GGAGTCAGCA GCCCCTGTCG TGAATCCAGC
TTTTCTTGA
|
|---|
| Protein sequence | MLPIDRSHLY DGGELASPEC VGERVIIPGP AGDLEGVTAC PDKETRGAVA VILHPHPLYG
GTLNNKVVYY LSKTCNQLGV PSLRFNFRGV GGSTGVYDDG RGETEDCLAV LDWVQERRPG
FDIWLAGFSF GAYVAYRSVH RHPRISRLLT VAPPVNLFDF TVLPAPSCPW TLIQGELDEL
VPATSVENWV DTLPVRPRQI LLPADHFFHG QLNALQGALL ASLSEEVSEM GVSSPCRESS
FS
|
|---|
| |