Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2836 |
Symbol | |
ID | 6878840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2820016 |
End bp | 2820792 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642790690 |
Product | ABC-2 type transporter, NodJ family |
Protein accession | YP_002221228 |
Protein GI | 198284907 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATAC GTGACGCCTT GCCGGGGGCC GGGGCGCTGG CCGTACTGCA GCGCAACTTC GGTGTCTGGC GCAAGTTGCT GGTGCCGAGC CTGCTCGGCA ACTTCGGTGA CCCGCTCCTT TATCTGCTGG CGCTGGGTTA CGGCCTGGGG CACTTCGTCG GGCAGATGGA CGGAATGCCC TATATCACCT TCATCGCCTC GGGCATCGTC GCCAGCAGCG TGATGAACAC CGCCAGCTTC GAGGGTCTGT ACTCGGCCTT TACCCGGATG AGCGCCCAGC ACACCTACGC AGCGATGCTG GCTACCCCCT TGCGGGTCAG CGACATCCTC GCCGGTGAGG TGGCCTGGTG CGCCGTCAAA GGGCTGATCA GTGCCGTGGC CATCATCATC GTCGCCAGTC TTTTTGACGC CATACAGGGC CCCTGGGTGA TCCTGACGCT GCCGGTCATT TTGCTCGCGG GGCTGAGCTT CGGCGGGGTG GCGCTGGTCA TCACGGCACT GGCACGCAGT TATGATTTTT TCATGTATTA TTTCACTCTG GCGGTGACGC CGATGTTTCT CTTCTGCGGC GTTTTCTACC CCCTCCAATC GCTGCCGCCC TTCGCTCAGG ACATCGCAGA GGTGCTGCCG CTGACCCATG CGGTGGCCCT GCTGCGGCCG CTGCTGACCG GGCATCTGCC CCATGAGGTG CTGTACCACA CGGGCGTGCT GCTGCTGTAC ACCCTGGTGG CCTATGTGCT TGGGTGGCGT CTGCTCAGTC GCCGGTTGCT GCGCTGA
|
Protein sequence | MPIRDALPGA GALAVLQRNF GVWRKLLVPS LLGNFGDPLL YLLALGYGLG HFVGQMDGMP YITFIASGIV ASSVMNTASF EGLYSAFTRM SAQHTYAAML ATPLRVSDIL AGEVAWCAVK GLISAVAIII VASLFDAIQG PWVILTLPVI LLAGLSFGGV ALVITALARS YDFFMYYFTL AVTPMFLFCG VFYPLQSLPP FAQDIAEVLP LTHAVALLRP LLTGHLPHEV LYHTGVLLLY TLVAYVLGWR LLSRRLLR
|
| |