Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2830 |
Symbol | |
ID | 6878833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2811790 |
End bp | 2812467 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642790684 |
Product | hypothetical protein |
Protein accession | YP_002221223 |
Protein GI | 198284902 |
COG category | [S] Function unknown |
COG ID | [COG3471] Predicted periplasmic/secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.753635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCGCA CGCATATGCT GTGGCTGCTT TTGGGGTTGC CGGGCCTGGC TGTGGCGAAG GTGCCGACGC TGGCCCTCAC CAGCGTCCAT TTCCAGGTGA TGACACATTA TCGGGCGCCC AGGACGGTAT TGCATGCCGA CCTGCAGGCG GAGGCATCGG GGAGAAGCCC GGCGAAGTTG GCCGCCATGG TCAATCAGGA CGTGTCCTGG GCAAAAGCCC GGCTGCAATC GGTGCCTGGG ATTACCTGGC GTAGCGCCGG GTACCAGACG CAGGCGACAG GCCAGACCGA TGCACCCTGG CTGGTACGGG AAGATCTGGC CGTGCAAAGC CCGGATCCGG CGGTGTTGCT CCCCTTGCTG GGCACGCTGC AATCCCGGTT ACACTTGGTC GGGATGCAGT ATGCAGCACC TTCCGTCGCT ATACACAAGG CGCTGAGAAC GGCCGAGCTG CGGGGACTGC GCCGGTACCG GAAACAAGCA CAGCAGAATT GCACGGCGCT GGGCTACCAT GGCGCGCGTC TGGGGCAGGT ATTCATCAAT ACGAATGTCG TCCCATTGGC GCGGCCGATG CCAGTCATGG CGTTAGCCGC CAAGGTCGTC CCTGGGCCCG TAGTCGGCCG GGGCGGGACG GAAAGGGGCA GGGTAGTGGT TGAAGGAAAT GCTTATTGCG AGAGGTGA
|
Protein sequence | MRRTHMLWLL LGLPGLAVAK VPTLALTSVH FQVMTHYRAP RTVLHADLQA EASGRSPAKL AAMVNQDVSW AKARLQSVPG ITWRSAGYQT QATGQTDAPW LVREDLAVQS PDPAVLLPLL GTLQSRLHLV GMQYAAPSVA IHKALRTAEL RGLRRYRKQA QQNCTALGYH GARLGQVFIN TNVVPLARPM PVMALAAKVV PGPVVGRGGT ERGRVVVEGN AYCER
|
| |