Gene Lferr_2830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2830 
Symbol 
ID6878833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2811790 
End bp2812467 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID642790684 
Producthypothetical protein 
Protein accessionYP_002221223 
Protein GI198284902 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.753635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCA CGCATATGCT GTGGCTGCTT TTGGGGTTGC CGGGCCTGGC TGTGGCGAAG 
GTGCCGACGC TGGCCCTCAC CAGCGTCCAT TTCCAGGTGA TGACACATTA TCGGGCGCCC
AGGACGGTAT TGCATGCCGA CCTGCAGGCG GAGGCATCGG GGAGAAGCCC GGCGAAGTTG
GCCGCCATGG TCAATCAGGA CGTGTCCTGG GCAAAAGCCC GGCTGCAATC GGTGCCTGGG
ATTACCTGGC GTAGCGCCGG GTACCAGACG CAGGCGACAG GCCAGACCGA TGCACCCTGG
CTGGTACGGG AAGATCTGGC CGTGCAAAGC CCGGATCCGG CGGTGTTGCT CCCCTTGCTG
GGCACGCTGC AATCCCGGTT ACACTTGGTC GGGATGCAGT ATGCAGCACC TTCCGTCGCT
ATACACAAGG CGCTGAGAAC GGCCGAGCTG CGGGGACTGC GCCGGTACCG GAAACAAGCA
CAGCAGAATT GCACGGCGCT GGGCTACCAT GGCGCGCGTC TGGGGCAGGT ATTCATCAAT
ACGAATGTCG TCCCATTGGC GCGGCCGATG CCAGTCATGG CGTTAGCCGC CAAGGTCGTC
CCTGGGCCCG TAGTCGGCCG GGGCGGGACG GAAAGGGGCA GGGTAGTGGT TGAAGGAAAT
GCTTATTGCG AGAGGTGA
 
Protein sequence
MRRTHMLWLL LGLPGLAVAK VPTLALTSVH FQVMTHYRAP RTVLHADLQA EASGRSPAKL 
AAMVNQDVSW AKARLQSVPG ITWRSAGYQT QATGQTDAPW LVREDLAVQS PDPAVLLPLL
GTLQSRLHLV GMQYAAPSVA IHKALRTAEL RGLRRYRKQA QQNCTALGYH GARLGQVFIN
TNVVPLARPM PVMALAAKVV PGPVVGRGGT ERGRVVVEGN AYCER