| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2824 |
|---|
| Symbol | |
|---|
| ID | 6878827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2806884 |
|---|
| End bp | 2807783 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642790678 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002221217 |
|---|
| Protein GI | 198284896 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGCC AGTTTTACGA CAAGGCCGCA GGCGCCTGGA CAGCCGCCGA GCACTATACG
GCGGATGGCC TGTTTCTGCT GACACCGGAG GCTGTTTATC GCTGCCCGCA ACTGGAAGCG
GTGCTGCAGC ACTGCTCGGA ACAACGTCTT TACTGCCAAA ACACCGAGAT CACCCTACGC
CTGCCCGTGG CGTCGCTGGA GCAGGACGCA CGGTTTGGCA CGGTGGCACG GATGGCGCAC
CTGACCCTGC ATCATACTCC CCGGAGTCTT GCCATTCTGG GTGAAGAAGC GTTGATCCCT
GCACTGCAGC GGGACTGGCT CGGGGACTTG CGGCATAGCG CCATGGACGA ACTGCTGCAG
CGCGTGCTGC TGAGCAGCAT CTATAGTCAC GAGCGGGTGG CGCGGGTGCT GGTGGAACGC
CTGCAGGTGC TGCGCATGGC GCTCAAAACC GCCATGGGTA ACGTGGAACT ACGCCAGATT
GTGGTTCTGA ATCGCGACCT TGGTGAACTG GTCATTGCCC TGCGGGAAAC TGGCCTTATT
CTGCGCGATG CGCTGCGCGC CACCGCCGGC GAGTCACCGG TCTACCCCCT GCTGGACGCG
GCGTTACGTG AACAACGCCG GATAGAGGAT GGCGTAAATC TGATTCACCA GCGCTATCTG
GCCGTGACGA ACGCCTATAA CGGCATCATC CAGAACAATG CCCATACCGT GATGAAGGTC
ATGACCGTAT GGCTGGCCCT GCTCATGATG CCCATCGCTT TCATTATGCC CTGGCACATG
ATGACGCCTT TGCCCTTGGA GCACTGGCAT TATCTCTGGT TCGGACTGCT CGCCTATGTC
TTTGGCGTGA CCTGGTTGTT CGCGCGCTGG GCCGGTAAGC ACGGCTTTTT TTCCATGTGA
|
|---|
| Protein sequence | MGCQFYDKAA GAWTAAEHYT ADGLFLLTPE AVYRCPQLEA VLQHCSEQRL YCQNTEITLR
LPVASLEQDA RFGTVARMAH LTLHHTPRSL AILGEEALIP ALQRDWLGDL RHSAMDELLQ
RVLLSSIYSH ERVARVLVER LQVLRMALKT AMGNVELRQI VVLNRDLGEL VIALRETGLI
LRDALRATAG ESPVYPLLDA ALREQRRIED GVNLIHQRYL AVTNAYNGII QNNAHTVMKV
MTVWLALLMM PIAFIMPWHM MTPLPLEHWH YLWFGLLAYV FGVTWLFARW AGKHGFFSM
|
|---|
| |