Gene Lferr_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2817 
Symbol 
ID6878820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2800729 
End bp2801394 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID642790671 
Productmethyltransferase GidB 
Protein accessionYP_002221210 
Protein GI198284889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.279584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC CGGAGCTGTC CTCGCAAGCG CTGCATGCCC GTCTGAATGC CGGACTGGTG 
GCTCTCGGCC TCGACCGCAC GGTCGGTGCT GAGCAGCGTG ACCTGCTGAT CCACTACGTC
GCCCTCCTGC AGCGCTGGAA TGCCACCCAC AACCTGACGG CGGTGCGGGA TCCCCTGGAG
ATGGTGCCCC GCCATCTGCT GGACAGCCTG GCGGTGCTCC CCTATTTGCC GGAGGGTGCG
GTGGTGGATA TCGGTAGCGG CGCCGGATTG CCCGGCATCC CCCTTGCTAT CTGCTGCCCA
GCACAAGCGT TCACCCTGGT GGAACCGGCG GCCAAACGGG TCGCTTTCCT CCGCTACGCC
ATCGCAGATC TTGGGTTGAC CAACGTGCAG GTTGCCCCGC AGGGCAGCGA AGATTATCAC
CCCGATCTCC TGCCAGACGT CATCATCAGC CGTGCCACCG CGCCCCTCGC TCGTCTCGAC
GCCATGACCA GGCACCTCCA GGGCCCGCAC ACCTGGGTGC TTGCCCAGAA AGGTCCGGGT
GTCGGGGAGG AGTTGACCGA CTGGCCCCGT GCGGCATCCC TCCACATCAC CCGTCGGGAC
CTCGCCGTTC CCGGCCTGCC ACCGCGTTTT CTGCTTTCCT GGCGCATCCC GGTCGCCACG
CCCTAG
 
Protein sequence
MTKPELSSQA LHARLNAGLV ALGLDRTVGA EQRDLLIHYV ALLQRWNATH NLTAVRDPLE 
MVPRHLLDSL AVLPYLPEGA VVDIGSGAGL PGIPLAICCP AQAFTLVEPA AKRVAFLRYA
IADLGLTNVQ VAPQGSEDYH PDLLPDVIIS RATAPLARLD AMTRHLQGPH TWVLAQKGPG
VGEELTDWPR AASLHITRRD LAVPGLPPRF LLSWRIPVAT P