Gene Lferr_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2815 
Symbol 
ID6878818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2799019 
End bp2799903 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID642790669 
ProductparB-like partition protein 
Protein accessionYP_002221208 
Protein GI198284887 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.121053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.211024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGG TCGGCCTGGG CCGGGGTCTG GACGCCCTTT TCGCCAGTGA AGGCGGTGCG 
GGCGCGGCCA TGCGCGAGGT TCCCCTTGAC GTACTGCAGC GCGGGCGTTA TCAGCCGCGC
GGCTTGATCA GTGCCGAGTC CCTGGAAGAA CTGACCGCAT CCATCCGCAG TCAGGGGGTG
GTGCAGCCTA TCGTCATTCG CGCCATCGGT GGCGGCCGCT ATGAGATCGT CGCCGGCGAG
CGCCGCTGGC GCGCGGCGCA ATTGGCGGGT CTCAGCCACA TCCCCGCCGT GGTCCGTGAG
TGCAGTGATG AACAGGCTCT TGCCATCGGC ATCATCGAGA ACATCCAGCG TCAGGCCCTG
AATCCGCTGG AAGAAGCGCA GGCCCTGCAA CGCCTGCTCG ACGAGTTCGG CCTCAGCCAC
GAAGCGCTGG CCGAATCCCT CGGCCGTTCC CGCGCTGCCA TCAGTAACCA GTTGCGCCTG
CTGCGCCTCT GTCCGGACCT CCATCCCCAT GTCGAAAACG GCGCGCTCAG CGCTGGTCAC
GCCCGTGCCC TGCTGACCCT GCCGGACGGG CGCCAGGTGC AGATTGCGGA AAGGGTGGTG
CGTGAGGCCC TGAGTGTGCG GGCCACCGAG CGACTGGTCC AGGCCGAAGG CCGGATCAAG
GCGCCTAAGG CGGAGCCCGA CGCCAATGTT GCCGCGCTTT CCGCCCGGAT CGCCGCGCGC
CTGGGGCTGC CCGTCGATCT GCGTGCGCAG GGGCGGGGCG GTGAATTGCG GATCCGCTGG
GAGAATCCGG AACAGGAGGC GGCACTTTTT CAGTATCTGG GCGTGTCTCT GGATGATGAC
GAAAGCGGAT ATTCGGCGCT TGACGGGCTG CATCGGCGTG TTTAG
 
Protein sequence
MKRVGLGRGL DALFASEGGA GAAMREVPLD VLQRGRYQPR GLISAESLEE LTASIRSQGV 
VQPIVIRAIG GGRYEIVAGE RRWRAAQLAG LSHIPAVVRE CSDEQALAIG IIENIQRQAL
NPLEEAQALQ RLLDEFGLSH EALAESLGRS RAAISNQLRL LRLCPDLHPH VENGALSAGH
ARALLTLPDG RQVQIAERVV REALSVRATE RLVQAEGRIK APKAEPDANV AALSARIAAR
LGLPVDLRAQ GRGGELRIRW ENPEQEAALF QYLGVSLDDD ESGYSALDGL HRRV