Gene Lferr_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2813 
Symbol 
ID6878816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2797841 
End bp2798590 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID642790667 
ProductATP synthase F0, A subunit 
Protein accessionYP_002221206 
Protein GI198284885 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0159651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.290047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCAG GCGATATCGC CCATCACCTC GTAAACTGGT CCATCGGCGA AGGCTTCTGG 
ACCTTTAACC TCGACACCAT CGTCATGGGT TGGGTCCTGG CCGCCATACT GGTGATTACC
GCCATGGTGG TGGGCTCCCG TTTGCAGGCC AGCGCCCCCA GCGGGATGCA GAACTGGCTG
GAGGGAGTGG TGGATTTCAT CGACGATCTG GTGCAAGGCA GCTTCCCGGT CAAGGATCCG
CTGATTGCCC CGGTCGCCAT GACGGTGTTT CTCTGGATTC TGTTGATGAA CAGCATGGAT
CTCATCCCCG CGTACCTGCC GGGGATGGTT GCGCATTGGT TCGGGATCGC GGAGTTCCGC
ATTACCCCCA CGGTCAACCT GAATACGACG CTGGGTGTCG CCGTCGCCGT GTTTCTGTTG
ATGATCGCCA CCAATCTGCG CGTCAAGGGA TTCTCCTATT TCAAGACCTA CCTGACCCAT
CCTTTCGGCA TCTTCCTGGC GCCGATAAAT ATCATCATGT CGCTGATCGA AGAGATCACC
AAACCGTTGA GCCTGGGTCT GCGACTTTTC GGCAACATGT TTGCCGGCGA ACTGGTCTTC
CTGCTGCTCG CCATGCTGCC CTGGTGGGGC GGGCTGGTCA TGGGCGAAGT CTGGTCGCTG
TTTGAGAGTT TGATCATCAT CCTGCAAGCA TTTATTTTCA CCGTGCTGAC GGTGGTTTAT
CTCGGCATGG CGAACATGCA GGATCACTAA
 
Protein sequence
MASGDIAHHL VNWSIGEGFW TFNLDTIVMG WVLAAILVIT AMVVGSRLQA SAPSGMQNWL 
EGVVDFIDDL VQGSFPVKDP LIAPVAMTVF LWILLMNSMD LIPAYLPGMV AHWFGIAEFR
ITPTVNLNTT LGVAVAVFLL MIATNLRVKG FSYFKTYLTH PFGIFLAPIN IIMSLIEEIT
KPLSLGLRLF GNMFAGELVF LLLAMLPWWG GLVMGEVWSL FESLIIILQA FIFTVLTVVY
LGMANMQDH