Gene Lferr_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2808 
Symbol 
ID6878811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2794036 
End bp2794902 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content61% 
IMG OID642790662 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_002221201 
Protein GI198284880 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.432553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.299257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG CCAAGGAAAT CCGGGGCCAG ATCAAGAGCG TAAAGAATAC GCGCAAGATC 
ACGCGAGCCA TGGAGATGGT GGCTGCCAGC AAGATGCGGC GCGCTCAGGA GCGGATGCGC
GCCGCCCGTC CCTACGCGGA GAAAATTCGC GAGGTATTGG GACATCTGGC GCAGGCCCAT
CCCGAGTATG AACACCCGTT GATGCAGGTG CGCCCCGTCA AAAAGGCAGG CTTTCTGGTG
GTGACCACGG ATCGAGGGCT TTGTGGCGGG CTCAATGTGA ATGTGCTGCG CAACGTCGTC
CAAAAGATGC GCGAGCTTCA CGAAGAGGGG GTCGAGTCGA ATCTCGCGGT GGTGGGCAAC
AAGGGGCTGG GCTTTTTGCG GCGCCATGGT GCGCATCTCG TGGCGGAGCT GAACGGATTG
GGTGACAGCC CGCATCTGGG CGACATGATC GGACCCATCC GGGCGATGGC GGATGCTTAC
GCCAAGGGCG AGGTCGACGT GGTCTATCTG GTCTCCTCCC GCTTCGTGAA TACGATGTTG
CAGCGAGCAA CGGTCGAGCA ATTGCTGCCG GTCGAAAAAC CGACGGCATC CGCAGAACAG
CGTGCGGAGT TGTGGGATTA CATCTATGAG CCCGAAGCCC GTCCGGTGCT GGATCGCCTG
ATGCAGCGCT ATGTGGAATC AGTGGTGTAC CAGGCGGTTA TCGAACACCT TGCCTGCGAA
CAGAGCGCGC GCATGGTCGC CATGAAAAGT GCGTCGGACA ACGCCAAACG TATGGTGGAT
GACCTCCAGT TGGCCTACAA CAAGGCGCGC CAGGCCGCCA TTACTCAGGA AATCGCCGAG
ATCAGCGCCG GTGCGGCGGC GGTTTGA
 
Protein sequence
MANAKEIRGQ IKSVKNTRKI TRAMEMVAAS KMRRAQERMR AARPYAEKIR EVLGHLAQAH 
PEYEHPLMQV RPVKKAGFLV VTTDRGLCGG LNVNVLRNVV QKMRELHEEG VESNLAVVGN
KGLGFLRRHG AHLVAELNGL GDSPHLGDMI GPIRAMADAY AKGEVDVVYL VSSRFVNTML
QRATVEQLLP VEKPTASAEQ RAELWDYIYE PEARPVLDRL MQRYVESVVY QAVIEHLACE
QSARMVAMKS ASDNAKRMVD DLQLAYNKAR QAAITQEIAE ISAGAAAV