Gene Lferr_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2760 
Symbol 
ID6878764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2744840 
End bp2745487 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content59% 
IMG OID642790619 
ProductABC transporter related 
Protein accessionYP_002221158 
Protein GI198284837 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.028424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGAT TCGAGGGGAT CACCAAGTCC TTTGGCTGGC GCCGGATTTT CCAGGACATC 
CGTGGCGAAC TGGTTCCAGG CGTTTATGCC CTGCAGGGGC CGAACGGCAG CGGTAAGTCC
ACGCTGCTGG GCATCCTGTC AGGGGCCATT GCGGCTGACG CGGGCGAGGT CTGGATAAAT
GACGTCAGCC TCCAGACGGC ACCGTTGCCC GCGCGGCAAG GGCTGTCCTA CGCGCCTGAT
GAAAGCCCTA TCTATCCTTT CATGACTGGG CGTGACCTGC TGGATTTCGT CGCCATGGCC
AAAAAGACCA GGGTCGGTCC GGATATTCTG GAATTGATCG CCCAATTCGG ACTGGACCCG
CACCTGCAGA CCCGTTTCAG TGCCATGTCG CTGGGCACAC AGAAAAAATT CATGCTCAGC
GCGGCCTGGA TCGGCGACCC GCAGGTGATG CTGCTGGATG AGCCGAGCAA TGGATTGGAC
AATCATGCCC GAGAAATCTT AGCCCAGTGC ATCAGGTTAC GTGGTCTGGA GGGGTTGGCG
CTGTTTGCGA GCCATGACGC TGCGTTCGTG GAAGCTTGCG GGGCCAATAT CTTGCGGATG
GAGCACCTGA AATCCCCTGA GCATTGTCTG GCGTTAGTCC GAGTATAA
 
Protein sequence
MLRFEGITKS FGWRRIFQDI RGELVPGVYA LQGPNGSGKS TLLGILSGAI AADAGEVWIN 
DVSLQTAPLP ARQGLSYAPD ESPIYPFMTG RDLLDFVAMA KKTRVGPDIL ELIAQFGLDP
HLQTRFSAMS LGTQKKFMLS AAWIGDPQVM LLDEPSNGLD NHAREILAQC IRLRGLEGLA
LFASHDAAFV EACGANILRM EHLKSPEHCL ALVRV