Gene Lferr_2759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2759 
Symbol 
ID6878763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2744489 
End bp2744809 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content46% 
IMG OID642790618 
Productisochorismate-pyruvate lyase 
Protein accessionYP_002221157 
Protein GI198284836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01803] chorismate mutase related enzymes 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0261778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG AAAGGCAAGT AGAGCCGGAA GCCTGTTCCG GAATGGACGA CGTCCGCCGA 
GAGATAGACC GCATTGACCG TGCAATCATT GCAATGCTCG GGAAACGATT CAAATATGTT
ATTGAGGCAT CAAAGTTTAA AACATCCGAA ATGTCGGTCC GTTCACCCGA TCGCTTTAAG
GCCATGCTTG AGATGCGCCG TGAATGGGCG CAATTAGAAG GCCTGAATCC GGATGCAATC
GCAAAGATGT ACAGTGATTT GGTGAACCAC TTTATCGAAG AGGAGATGAA ACAATGGGAG
ATTCATCAAC GAACGATATA G
 
Protein sequence
MNIERQVEPE ACSGMDDVRR EIDRIDRAII AMLGKRFKYV IEASKFKTSE MSVRSPDRFK 
AMLEMRREWA QLEGLNPDAI AKMYSDLVNH FIEEEMKQWE IHQRTI