| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2754 |
|---|
| Symbol | |
|---|
| ID | 6878758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 2738646 |
|---|
| End bp | 2739548 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642790613 |
|---|
| Product | Cytochrome c-like protein |
|---|
| Protein accession | YP_002221152 |
|---|
| Protein GI | 198284831 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3258] Cytochrome c |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0564833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0019216 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGCTG ATTCGGGACC ATTTTGGTGT GGATCTGCAG GAACGCCTGA TTGGCAAGTC
TCTCGAGCGT TGGGGCTTCA CGCCGCAACG CCCCGTCAAA AGAGCGTTGG AGCAGAATCC
GGAAGCGGTC CGTCAGTGGC TGGAGCAGGA CTATCCCCGC CTACGCGCTC AGGCTGCCCA
GGAAGGGACG CCAGCATCCA TAAACACACG CGCAGATCCT GTTATGTATG CCTATGCCAC
TATCAGATGC CGACTTCACG TCAACAACGA ATATCGTCTA TACTCTCAAA AGTTGACGGC
GCGTTTGTTT TCCAGATACT GAAGCATAGA CTTTTACTAC TAAGGGCCTT CCATACTGTT
AGCTCCTGGC TTCGAGCCAG TGTAGATAAC GAGTTCCCGT CAAATCATGG GGACGGTAAC
TACCTGACAA AAGCCAGACC GGTTGGTTGC CAGTTGAAAA AGGAGATTTT ACTCATGGGA
TATAAAATAC GTTTTCTCAT AAGCACGTTG TCGGCATCTG CCTTGCTCTG GTGTGTAACC
GCTTCTGCGG AAACATCGAC AAACGCAATG CAAAATGCTA TCAAAAACGG CTCGACACTT
TTTGCCTCAA CATCCCTGGG GAGTCGCGGT AATTCCTGCA TGACCTGTCA TCGTGGAGGT
GGACGTAGCG AAGGAATTTT ACCAAATGGT AAATCCATAC CCAGCCTCAT CGGTGCTGCG
GCCACTTTCC CCCACTATAA CAAACGGGCT GGGCAGGTGA TTACCCTTGA TATGCAAGTT
AACTCATGTA TCAAAAACGC TCTTCTGGGT AAACAGCTGC CTTATAACAG CAAGAAAATG
GTAGCACTCG TTAGCTATTT GACTTCCCTT TCTCAAGGCA AGAAAATTAA CATTATCAGA
TAA
|
|---|
| Protein sequence | MCADSGPFWC GSAGTPDWQV SRALGLHAAT PRQKSVGAES GSGPSVAGAG LSPPTRSGCP
GRDASIHKHT RRSCYVCLCH YQMPTSRQQR ISSILSKVDG AFVFQILKHR LLLLRAFHTV
SSWLRASVDN EFPSNHGDGN YLTKARPVGC QLKKEILLMG YKIRFLISTL SASALLWCVT
ASAETSTNAM QNAIKNGSTL FASTSLGSRG NSCMTCHRGG GRSEGILPNG KSIPSLIGAA
ATFPHYNKRA GQVITLDMQV NSCIKNALLG KQLPYNSKKM VALVSYLTSL SQGKKINIIR
|
|---|
| |