Gene Lferr_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2748 
Symbol 
ID6878752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2732381 
End bp2733145 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content52% 
IMG OID642790608 
Productcytochrome c oxidase subunit II 
Protein accessionYP_002221147 
Protein GI198284826 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000027283 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000791223 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCAG CAAAAGAAAA TTTATGGAAA GCTTTCCGTG GCTTGGTGAT GGTCTGGATT 
ATTGGCCTGG CGATTGGCGA AACGCTGATG GCCTGGGGCA TCGGTAACTG GCCAATTTTG
GGGAGTATCC AGGCGCATAT TACCGCGGAT GCCACCACAT ACCTGTTATG GCAGGCCGTA
GCCATATATG TGCTGGTCGG CGGTGCGGTT GTATATAGCG CGTTTCGTTT CCGCGCATCG
TCCATGTCAG ACACTGCGGC GCCGGCTTAT CAAAAGCGGA CCTGGGCACC TTTCGTAGTG
ACCTGGCTGG TTTTGGCCAT AGGCATCAAC CTGGCAAATA CCATTTACCC GGGTATGGTG
GGCCTGGAAC AACTTTGGGG TATCCAGTTA GATACGAAAA ATCCATTGGT GATCGATGTT
ACCGCGCAAC AATGGAAGTG GACGTTCTCT TATCCCAAGC AGGGCGTAAC GGATGTTTCA
CAACTGGTGG TTCCAGAGGG GCGCACCATA GACTTTGTTC TGCGGACAAA GGACGTCATG
CACGATTTTT GGGTACCTGC CTGGGGTGAG AAAAAGGACG TGATCCCAAA TGAAGTGCGG
CACTTGTTTA TTACACCCAC CATGCTGGGA ACAACCGCTA CAAACCCCAT GCTGCGTGTA
CAGTGTTCCT TGATTTGTGG CAACGGACAT CCGTTGATGC GCGCTCCGGT TAAGGTGGTG
ACACCAGCGG ACTTCAAGAC TTGGGTGGCA AACAATAGCT TCTAG
 
Protein sequence
MNAAKENLWK AFRGLVMVWI IGLAIGETLM AWGIGNWPIL GSIQAHITAD ATTYLLWQAV 
AIYVLVGGAV VYSAFRFRAS SMSDTAAPAY QKRTWAPFVV TWLVLAIGIN LANTIYPGMV
GLEQLWGIQL DTKNPLVIDV TAQQWKWTFS YPKQGVTDVS QLVVPEGRTI DFVLRTKDVM
HDFWVPAWGE KKDVIPNEVR HLFITPTMLG TTATNPMLRV QCSLICGNGH PLMRAPVKVV
TPADFKTWVA NNSF