Gene Lferr_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2729 
Symbol 
ID6878733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2717413 
End bp2717661 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content45% 
IMG OID642790589 
Producttwin-arginine translocation protein, TatA/E family subunit 
Protein accessionYP_002221128 
Protein GI198284807 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000733781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATATAT TCAGTCTTCC ACATTTGATT ATTTTGTTGT TGATCGTTAT GGCGCTTTTC 
GGGACATCAA AAATAAAGAA TATAGGAGGT GATCTAGGCT CCGCCATAAA AAGTTTCCGG
CAGGCGATGA AGGAAGAAGA ACGTTCGGAA TCGCCAACAA CGGGCGGACC AGTAACTAAG
GCGCTCGAGC CCGGTGCAGA TGCAGAGACA GGAGAAACCA TCGCAAAAAG TCTTCATACC
AAATCATAA
 
Protein sequence
MDIFSLPHLI ILLLIVMALF GTSKIKNIGG DLGSAIKSFR QAMKEEERSE SPTTGGPVTK 
ALEPGADAET GETIAKSLHT KS