Gene Lferr_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2716 
Symbol 
ID6878720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2704077 
End bp2705216 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content59% 
IMG OID642790576 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002221115 
Protein GI198284794 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000443997 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGAATTC TCGTCGTCGG TGGGGGTATG GGGGGCACCA TTTTCGCCAA TCATCTGGCC 
CGCCGTATCC ACCATGAAAT GAAAACCGGC AAGGCGCGCA TCACCATGCT CTCGGCCAGC
CACGAACACG TCTATCAGCC CGGCTGGCTT TATGTGGCCA TGGGCCGGAC GACCCCGGAT
GAACTGGTCC GCGAACAGCA GGGCCTGCTG GAGCCCGGTA TCGAGTTTCA TGTCGATCCC
GTGGAGGAGT TTCATCTGGC TGACAATCAT GTCCAGTGCA AGAGCGGCAA GGTCCATGAG
TATGATGTCA TCGTCATTTC CACCGGCTCC CGTCCCATGC CAGAAAACAT CCCCGGCCTC
AAGGAGAACT CCATCAACTG TTATACCGCG GAGAATGCGG TGGAGTTCTT CCGGCAACTC
TCGGACTTCA AGGGGGGGCG CATCGTCGTC ACCGTCGGTC TGCCGCACAA GTGTCCGATG
ATCCCGCTGG AAATCACCTT CGCCATGCAC GATTTCATTC AGGATCGTGG CCTGCTGGAC
AAGACCGAGT TCTACTACAC CTATCCCATC GGTCGGGTGC ACAGCCTGGA GAATGTGGCG
AAGTGGGCGG CACCGGAATT CGACCGGATG GGCATCCAGT ACGAGACCCT GTTCAACATG
AAGGAAGTCG ATGGCAAAAA TGCCCAGGTC CTCAGTGAGG AGGGGGGTGC CGTCAAGTAT
GACCTGTTGG TGGCGGTGCC GCCGCACAAG GGTCAGGAAG TCATCGAGAA GAATGGCCTC
GGGGAGAATG GCTGGATTCC TACCAACCGC ACGTCCCTGC ACATGGAAGG GGAATACGGC
AAGAATGTCA TCATCCTGGG GGATACCACC AACCTGCCGA TCAGCAAGGC CGGCTCCACC
ACGCATTTCG AGGCAGAGGT TGCCGCCGAG AATGTCGCGG CGGTGATCAA GATCGGGCGG
CCGGTACGCA GTTATGATGG CAAGGTCTTC TGCTTCATAG AAGCGGGCAA GGATCGCGCC
ACGTATGCCA TGTTTGATTA CCAGCACCCT CCGCAGCCCA AGGCCCCGAC CGGTGCGGTC
CATGCCTTCA AGATGGCCTA CAACCAGCTC TATTGGGCCA GTGCCCGCGG CTTGCTCTAA
 
Protein sequence
MRILVVGGGM GGTIFANHLA RRIHHEMKTG KARITMLSAS HEHVYQPGWL YVAMGRTTPD 
ELVREQQGLL EPGIEFHVDP VEEFHLADNH VQCKSGKVHE YDVIVISTGS RPMPENIPGL
KENSINCYTA ENAVEFFRQL SDFKGGRIVV TVGLPHKCPM IPLEITFAMH DFIQDRGLLD
KTEFYYTYPI GRVHSLENVA KWAAPEFDRM GIQYETLFNM KEVDGKNAQV LSEEGGAVKY
DLLVAVPPHK GQEVIEKNGL GENGWIPTNR TSLHMEGEYG KNVIILGDTT NLPISKAGST
THFEAEVAAE NVAAVIKIGR PVRSYDGKVF CFIEAGKDRA TYAMFDYQHP PQPKAPTGAV
HAFKMAYNQL YWASARGLL