Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2706 |
Symbol | |
ID | 6878710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2693215 |
End bp | 2694006 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642790566 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002221105 |
Protein GI | 198284784 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000459649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000323747 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAATAATT ACGTACCAGT TGATGGCTTG CTGAACGGGC GTGTAATCAT TGTTACAGGA GCCGGAGAAG GGATTGGTCG CTGTGCTGCC GTAGAATTTG CTCGTTTGGG TGCTGAAGTA GTGTTATTGG GCCGAACTCA GCGGAAGCTA GAGGGTGTAT ACGACGAAAT TGTTGATTCA GGTTATAAAG AGCCGGTTAT ACATCCCATG GATTTGCTGA CTGCCAAGGG GCGCGATTAT CAGGATTTTG CGCAGCGCCT GAAGGAGAGT TTAGGCCGTT TGGATGGGAT CCTGCACAAC GCTGCGGAAC TCGATATATT GACACCGATC CAGTATTACG ACGAGGAGTT GTGGGAAAGC GCGATGAAAG TGAACGTGAC CGCGCCATAC TTATTGACAC AAGCCTGTTT GCCACTGTTG CTGGCATCCG AGGATGCCTC CATTGTTTTC ATTACTGATG ACTGCGCCCG TGAGGCAAAA GGTTATTGGG GTGCCTATGC TGTAAGTAAA GCGGCAGTAC AACACCTTGG ACTTACGCTT GCAATTGAAT TACAAAACAC CAACGTTCGC GTGAACGTGA TAAATCCTGG GCCATGCCGT ACGGGAATGC GGGTGAGGAC ACATCCGGGA GCGTCAATAA TGTCCGTTCC ACCACCGATA GCGATCATGC CCCTTTATGA ATATTTGTTA GGGCCCGATA GCAAAAATAC ACGTGGGCAG ATCATGAATG CCAGAGATTG GCTGGATGCG GAACACGATG ATCGCCAGAT AGTTGCTGTT CTTGAGCAAT AA
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Protein sequence | MNNYVPVDGL LNGRVIIVTG AGEGIGRCAA VEFARLGAEV VLLGRTQRKL EGVYDEIVDS GYKEPVIHPM DLLTAKGRDY QDFAQRLKES LGRLDGILHN AAELDILTPI QYYDEELWES AMKVNVTAPY LLTQACLPLL LASEDASIVF ITDDCAREAK GYWGAYAVSK AAVQHLGLTL AIELQNTNVR VNVINPGPCR TGMRVRTHPG ASIMSVPPPI AIMPLYEYLL GPDSKNTRGQ IMNARDWLDA EHDDRQIVAV LEQ
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