Gene Lferr_2705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2705 
Symbol 
ID6878709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2692440 
End bp2693222 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content51% 
IMG OID642790565 
Productcytochrome c class I 
Protein accessionYP_002221104 
Protein GI198284783 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000103804 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000307641 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGTCCAAC TTAGCTACAC CAAAAAATCC GGCAAGATGG TGGCCATGGT ATCTGTCGTG 
TTTATTGGTA TGGGTGCGAT GCCTTTTGAC ACAATTGCTT ATGGAGCGGC AAGCGCACCG
AACAGCAAGA TTGTTGCTGC CACCGTTTCT TCGTCCGCGG CCGTTACGGC TCCAACGCAA
TCCGTGGCGA GTGCACAGAA AACGACGGAT ACCAATGCGG GAGGCATTCC GCAACCGGTA
AGCACTACCT GTATGGCATG TCACGGAATG ACTGGAATAT CCCCCGGTGG ATCAATGTTT
CCAGATTTGG CTGGTCAGTG GGCTCCCTAT CTGGTCAAAC AACTCAATAA CTTTAGAAGT
CATACGCGTG CGGATCCCAT GGCAAAGGCT ATTATGTGGG GCATGGCCGC GTCGCTGACG
CCGGCACAGG TGCAACAGGT AGCAAATTAC TTCTCTACCC AGACTCCACC GAAAGCAAAA
ATGGTAAACG CTAAACTAGC GGCAGAAGGA AAGAAGATAT ATGAAGGTGG AATATCTAAC
CTTCATGTGC CTGCCTGTAT GGCATGCCAT GGCCCAACCG GTCTGGGTGA CCCGCCTTAC
TTTCCTCGCT TGGCAGGTCA ACGACGAGCC TACGTAGAAT TGCAGCTGCA TTATTTCAAA
AAAGGTCTTA GAACCAATGA TCCGTATGCC ATAATGCGGT ACGTCGCCTC GCGGCTAACG
GGGCCGCAGA TTACCGAGTT AGCAACCTAT GTACGCAGTT TACCCGGAGG TGCTAATGAA
TAA
 
Protein sequence
MVQLSYTKKS GKMVAMVSVV FIGMGAMPFD TIAYGAASAP NSKIVAATVS SSAAVTAPTQ 
SVASAQKTTD TNAGGIPQPV STTCMACHGM TGISPGGSMF PDLAGQWAPY LVKQLNNFRS
HTRADPMAKA IMWGMAASLT PAQVQQVANY FSTQTPPKAK MVNAKLAAEG KKIYEGGISN
LHVPACMACH GPTGLGDPPY FPRLAGQRRA YVELQLHYFK KGLRTNDPYA IMRYVASRLT
GPQITELATY VRSLPGGANE