Gene Lferr_2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2669 
Symbol 
ID6878668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2650613 
End bp2651170 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID642790526 
Productprotein of unknown function DUF179 
Protein accessionYP_002221070 
Protein GI198284749 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.670234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT CTTCTCTCAA AAATCATCTG CTCATTGCCA TGCCCGCGCT GCACGACGGC 
GTTTTCGACC GTACGGTGAT CGTGGTCTGC GAACACAATG CCGAAGGCGC CATGGGCGTG
GTTATCAACC GGCTGGTGGA CATCAATATG TCCGATGCCC TGCGTGCGGT GGACATCCAG
CCCTCTGAAG AAATGATCCA TCGCCCGGTA TACTGGGGCG GGCCGATCCA GCCGCAGCAT
GGATTTATTC TGCATTCGCC GCGGGGCGAA TGGCTTTCCA GTCTGGAGGT CAACGACGAT
CTGGCGCTGA CCAGTTCACC GGATATTCTG CAGGCCATCG CCCAGCACGA AGAGCCGCAG
CGTTACCTCC TGGCCCTGGG TTATGCCGGC TGGGGCGCGC AGCAACTGGA AGCGGAGCTG
CAGGATAACG CATGGTTGCA CGGCCCCTTG GATATGGCGG TGATTTTCGA CCTGCCCGCC
AGTGAGCGCT GGCAGGCCGC AGCGCGCTTG CTGGGGGTGG ATATGCGCCT GCTCAGCGGT
GCGGCAGGTC ATGCCTGA
 
Protein sequence
MTFSSLKNHL LIAMPALHDG VFDRTVIVVC EHNAEGAMGV VINRLVDINM SDALRAVDIQ 
PSEEMIHRPV YWGGPIQPQH GFILHSPRGE WLSSLEVNDD LALTSSPDIL QAIAQHEEPQ
RYLLALGYAG WGAQQLEAEL QDNAWLHGPL DMAVIFDLPA SERWQAAARL LGVDMRLLSG
AAGHA