Gene Lferr_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2660 
SymbolrbcL 
ID6878659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2639264 
End bp2640685 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content59% 
IMG OID642790517 
Productribulose bisophosphate carboxylase 
Protein accessionYP_002221061 
Protein GI198284740 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA AGACCTATAA CGCGGGTGTG AAGGATTACC GGAACACCTA TTGGGAACCG 
GATTACAGCG TCAAGGATAC CGATATCCTT GCCGTGTTCA AGATTACTCC CCAGGCGGGC
GTGGATCGTG AGGAGGCCGC TGCTGCGGTT GCCGCCGAAT CCTCTACCGG CACCTGGACC
ACGGTGTGGA CGGACCTTCT CACCGACCTT GACTACTACA AGGGGCGCGC ATACAGGATT
GAAGACGTTC CGGGCGATGA TACCTGTTTC TATGCGTTCA TTGCCTACCC CATCGATCTC
TTCGAAGAAG GTTCCGTGGT CAACGTCTTC ACCTCGCTGG TTGGTAACGT CTTCGGCTTC
AAGGCGGTAC GTGCCCTGCG CCTGGAAGAC GTCCGTTTCC CCATCGCCTA CGTCAAGACC
TGCGGTGGGC CACCCCACGG GATTCAGGTC GAACGCGACA TCATGAACAA GTATGGTCGC
CCATTGCTGG GCTGCACCAT CAAACCCAAG CTGGGTTTGT CGGCCAAGAA CTATGGTCGC
GCCTGCTATG AAGGTCTGCG TGGTGGACTC GACTTCACTA AAGATGACGA AAACGTCAAT
AGCCAGCCTT TCATGCGCTG GAGGCAGCGT TTCGACTTCG TCATGGAGGC CATCCAGAAG
GCCGAGGCCG AGACCGGAGA GCGTAAGGGG CACTACCTGA ACGTTACCGC CCCGACTCCG
GAGGAAATGT ACAAGCGTGC GGAGTACGCC AAGGAAATCG GCGCACCCAT CATCATGCAC
GATTACATCA CCGGCGGCTT CTGCGCCAAC ACGGGTCTGG CCAACTGGTG CCGCGACAAC
GGCATGCTCC TGCACATTCA CCGCGCCATG CATGCGGTGC TGGACCGCAA CCCTCACCAC
GGCATCCACT TCCGTGTGCT GACCAAGATT CTCCGTCTGT CCGGCGGCGA TCACCTGCAC
TCGGGTACCG TGGTCGGCAA GCTCGAAGGC GACCGTGAGG CGACCCTGGG CTGGATCGAC
ATCATGCGTG ATAGATTCAT CAAGGAAGAT CGCAGCCGAG GCATCTTCTT CGACCAGGAC
TGGGGCTCCA TGCCGGGTGT GATGCCGGTC GCTTCCGGTG GTATCCACGT TTGGCACATG
CCGGCGCTGG TCACCATCTT TGGTGATGAC TCGGTGTTGC AGTTCGGTGG CGGCACCCTC
GGTCATCCCT GGGGCAATGC CGCAGGTGCT GCGGCCAACC GCGTCGCGCT GGAAGCCTGT
GTGGAAGCCC GCAACCGCGG TGTGGCCATC GAGAAGGAAG GCAAGGCTGT TCTCACTGAG
GCGGCCAAGC ACTCCCCCGA ACTCAAGATT GCCATGGAAA CGTGGAAAGA GATCAAGTTC
GAATTCGATA CGGTCGACAA GCTGGACGTT GCCCATAAAT AA
 
Protein sequence
MAVKTYNAGV KDYRNTYWEP DYSVKDTDIL AVFKITPQAG VDREEAAAAV AAESSTGTWT 
TVWTDLLTDL DYYKGRAYRI EDVPGDDTCF YAFIAYPIDL FEEGSVVNVF TSLVGNVFGF
KAVRALRLED VRFPIAYVKT CGGPPHGIQV ERDIMNKYGR PLLGCTIKPK LGLSAKNYGR
ACYEGLRGGL DFTKDDENVN SQPFMRWRQR FDFVMEAIQK AEAETGERKG HYLNVTAPTP
EEMYKRAEYA KEIGAPIIMH DYITGGFCAN TGLANWCRDN GMLLHIHRAM HAVLDRNPHH
GIHFRVLTKI LRLSGGDHLH SGTVVGKLEG DREATLGWID IMRDRFIKED RSRGIFFDQD
WGSMPGVMPV ASGGIHVWHM PALVTIFGDD SVLQFGGGTL GHPWGNAAGA AANRVALEAC
VEARNRGVAI EKEGKAVLTE AAKHSPELKI AMETWKEIKF EFDTVDKLDV AHK