Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2660 |
Symbol | rbcL |
ID | 6878659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2639264 |
End bp | 2640685 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790517 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_002221061 |
Protein GI | 198284740 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTCA AGACCTATAA CGCGGGTGTG AAGGATTACC GGAACACCTA TTGGGAACCG GATTACAGCG TCAAGGATAC CGATATCCTT GCCGTGTTCA AGATTACTCC CCAGGCGGGC GTGGATCGTG AGGAGGCCGC TGCTGCGGTT GCCGCCGAAT CCTCTACCGG CACCTGGACC ACGGTGTGGA CGGACCTTCT CACCGACCTT GACTACTACA AGGGGCGCGC ATACAGGATT GAAGACGTTC CGGGCGATGA TACCTGTTTC TATGCGTTCA TTGCCTACCC CATCGATCTC TTCGAAGAAG GTTCCGTGGT CAACGTCTTC ACCTCGCTGG TTGGTAACGT CTTCGGCTTC AAGGCGGTAC GTGCCCTGCG CCTGGAAGAC GTCCGTTTCC CCATCGCCTA CGTCAAGACC TGCGGTGGGC CACCCCACGG GATTCAGGTC GAACGCGACA TCATGAACAA GTATGGTCGC CCATTGCTGG GCTGCACCAT CAAACCCAAG CTGGGTTTGT CGGCCAAGAA CTATGGTCGC GCCTGCTATG AAGGTCTGCG TGGTGGACTC GACTTCACTA AAGATGACGA AAACGTCAAT AGCCAGCCTT TCATGCGCTG GAGGCAGCGT TTCGACTTCG TCATGGAGGC CATCCAGAAG GCCGAGGCCG AGACCGGAGA GCGTAAGGGG CACTACCTGA ACGTTACCGC CCCGACTCCG GAGGAAATGT ACAAGCGTGC GGAGTACGCC AAGGAAATCG GCGCACCCAT CATCATGCAC GATTACATCA CCGGCGGCTT CTGCGCCAAC ACGGGTCTGG CCAACTGGTG CCGCGACAAC GGCATGCTCC TGCACATTCA CCGCGCCATG CATGCGGTGC TGGACCGCAA CCCTCACCAC GGCATCCACT TCCGTGTGCT GACCAAGATT CTCCGTCTGT CCGGCGGCGA TCACCTGCAC TCGGGTACCG TGGTCGGCAA GCTCGAAGGC GACCGTGAGG CGACCCTGGG CTGGATCGAC ATCATGCGTG ATAGATTCAT CAAGGAAGAT CGCAGCCGAG GCATCTTCTT CGACCAGGAC TGGGGCTCCA TGCCGGGTGT GATGCCGGTC GCTTCCGGTG GTATCCACGT TTGGCACATG CCGGCGCTGG TCACCATCTT TGGTGATGAC TCGGTGTTGC AGTTCGGTGG CGGCACCCTC GGTCATCCCT GGGGCAATGC CGCAGGTGCT GCGGCCAACC GCGTCGCGCT GGAAGCCTGT GTGGAAGCCC GCAACCGCGG TGTGGCCATC GAGAAGGAAG GCAAGGCTGT TCTCACTGAG GCGGCCAAGC ACTCCCCCGA ACTCAAGATT GCCATGGAAA CGTGGAAAGA GATCAAGTTC GAATTCGATA CGGTCGACAA GCTGGACGTT GCCCATAAAT AA
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Protein sequence | MAVKTYNAGV KDYRNTYWEP DYSVKDTDIL AVFKITPQAG VDREEAAAAV AAESSTGTWT TVWTDLLTDL DYYKGRAYRI EDVPGDDTCF YAFIAYPIDL FEEGSVVNVF TSLVGNVFGF KAVRALRLED VRFPIAYVKT CGGPPHGIQV ERDIMNKYGR PLLGCTIKPK LGLSAKNYGR ACYEGLRGGL DFTKDDENVN SQPFMRWRQR FDFVMEAIQK AEAETGERKG HYLNVTAPTP EEMYKRAEYA KEIGAPIIMH DYITGGFCAN TGLANWCRDN GMLLHIHRAM HAVLDRNPHH GIHFRVLTKI LRLSGGDHLH SGTVVGKLEG DREATLGWID IMRDRFIKED RSRGIFFDQD WGSMPGVMPV ASGGIHVWHM PALVTIFGDD SVLQFGGGTL GHPWGNAAGA AANRVALEAC VEARNRGVAI EKEGKAVLTE AAKHSPELKI AMETWKEIKF EFDTVDKLDV AHK
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