| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2654 |
|---|
| Symbol | |
|---|
| ID | 6878653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2635077 |
|---|
| End bp | 2635805 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790511 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_002221055 |
|---|
| Protein GI | 198284734 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTGA TTCCGGCCAT CGACCTCAAG GGCGGGAACT GTGTGCGTTT ACGGCAAGGC
CGGATGGAGG ACGACACGGT ATTCTCGGAT GATCCGGTCG CCACGGCACA GCGCTGGGTA
GAGGCGGGCG CCAAACGGCT GCACATCGTC GATCTCGACG GCGCTGTCCA AGGAGAACCG
GTCAATGCGC ACGCCATAGC CGCCATCTGT GCGGGTTTCC CTGACCTTGA AATTCAGGTC
GGCGGTGGTA TCCGCAGCGA AGAACAGATC GAAACCTATA TCCAGGCCGG GGTTCGCTAC
GTGATCATCG GCACCCAGGC GGTCAAGGCC CCCGGTTTCG TCGCCGATGC CACCGTAAGT
TTTCCTGGCC ATATCATGGT GGGTATCGAC GCCCGTGACG GCAAAGTGGC TACTGAAGGC
TGGTCCAAGC TATCCCGTCA CGACCCCATC GATCTCGCAC AACGCTTCGC CGCCGACGGC
ATAGAAGCCA TCATCTACAC CGACATCAGC CGCGACGGCA TGCTCAGCGG CCCCAATATT
TCTGCGACGG TTGCGCTGGC TCAGGCGGTG CCCGTGCCGG TCATCGCCTC GGGCGGTATT
GCCAATCTGG AACAGGTACT GGCGCTCAAG GCCCATGAGA GTGACGGTAT CACCGGCGCC
ATTACCGGGC GCGCCATTTA TGAAGGGACC CTGGACTTTT CTCAGGCCCG CGCCCAGGCC
GAGGCCTGA
|
|---|
| Protein sequence | MLLIPAIDLK GGNCVRLRQG RMEDDTVFSD DPVATAQRWV EAGAKRLHIV DLDGAVQGEP
VNAHAIAAIC AGFPDLEIQV GGGIRSEEQI ETYIQAGVRY VIIGTQAVKA PGFVADATVS
FPGHIMVGID ARDGKVATEG WSKLSRHDPI DLAQRFAADG IEAIIYTDIS RDGMLSGPNI
SATVALAQAV PVPVIASGGI ANLEQVLALK AHESDGITGA ITGRAIYEGT LDFSQARAQA
EA
|
|---|
| |