Gene Lferr_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2648 
Symbol 
ID6878647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2629484 
End bp2630755 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID642790505 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_002221049 
Protein GI198284728 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGC TGCTGCTGCG TGGCAATGGC CCCCTGCGTG GTGAGTTGCG GATTTCCGGG 
GCCAAAAACG CGGCCTTGCC CTGTCTCGCT GCCACCCTGC TGGCGCGGGA GCCGGTGCGG
CTGTGCAATA TTCCGCATCT GCGGGACATC ACCACGACCC TGGAGTTGTT GAGCACGCTC
GGTGCAAGGG TACTGGTGGA CGGCCAGCTC GGGATCGAAG TCGATCCACG CCCGGTACAT
TCGGTGGTCG CTCCTTATGA ACTGGTGAAG ACCATGCGGG CCTCGATACT GGTTCTCGGG
CCATTGCTGG CCCGACACGG ATCGGCAGAA GTGAGCCTGC CCGGTGGCTG TGCCATCGGC
AGCCGCCCGG TGAGTGTCCA TCTCAGCGGC CTGCAGGCGT TGGGTGCCGA AATCACCGTA
GAGGACGGTT TCGTTAAAGC GCAGGCAGCA CGCCTGCGCG GCACGCGCAT CGTTATGGAG
ATGGTCTCCG TCACCGGTAC GGAAAACCTG CTCATGGCAG CCACCCTCGC CGAGGGGCGC
ACCATCCTGG AAAATGCCGC CCGCGAACCG GAAATCGTCG ATCTCGCCCG TTGTCTGTCC
GCCATGGGTG CGCGCATTTC CGGGGCCGGA ACGTCGGTCA TCGAGATCGA GGGCGTGGCG
GAGCTGCATG GCGCCGAACA CAGTGTTGTG CCCGACCGCA TCGAGACCGG TACGTACCTG
GTGGCTGCGG CCATGACTGG CGGCGACATC TGCCTCAAAC GCACCGACGC GGGCCTGCTG
GAGAGCGTCC TCCTCAAACT GAAGGAAGCA GGGGCCGAGG TCACGACCGG GGCAGACACG
ATCCGCATCC GCATGAAACG GCGGCCACGG GCAGTGGATG TCCGCACTGC GCCCTTTCCG
GCCTTCCCCA CGGACATGCA GGCGCAGTTC ATGGCGATGA ACTGCATTGC CGAAGGGAGC
AGCGTCGTCA CCGAAACCAT CTTCGAGAAT CGCTTCATGC ACGTTTCCGA GTTGCAACGG
CTGGGTGCCG ACATCAATGC CGATGGCAAA ACCGCCGTGG TGCGGGGGGT ACAGCGTTTG
CGCGGCGCCC CCGTGATGGC AACCGATCTG CGGGCATCGG CGTCGCTGGT CCTGGCCGGT
CTGGTGGCGG AGGGCGAAAC CCTCATCGAC CGCATCTATC ATCTGGATCG TGGCTACGAG
GTCATCGAAG AGAAGCTCAG CGCCCTCGGT GCAGATATCC GCCGGATAAG CAACACCAGG
AGTGTCGCAT GA
 
Protein sequence
MDKLLLRGNG PLRGELRISG AKNAALPCLA ATLLAREPVR LCNIPHLRDI TTTLELLSTL 
GARVLVDGQL GIEVDPRPVH SVVAPYELVK TMRASILVLG PLLARHGSAE VSLPGGCAIG
SRPVSVHLSG LQALGAEITV EDGFVKAQAA RLRGTRIVME MVSVTGTENL LMAATLAEGR
TILENAAREP EIVDLARCLS AMGARISGAG TSVIEIEGVA ELHGAEHSVV PDRIETGTYL
VAAAMTGGDI CLKRTDAGLL ESVLLKLKEA GAEVTTGADT IRIRMKRRPR AVDVRTAPFP
AFPTDMQAQF MAMNCIAEGS SVVTETIFEN RFMHVSELQR LGADINADGK TAVVRGVQRL
RGAPVMATDL RASASLVLAG LVAEGETLID RIYHLDRGYE VIEEKLSALG ADIRRISNTR
SVA