Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2645 |
Symbol | |
ID | 6878644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2627961 |
End bp | 2628767 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790502 |
Product | ABC-2 type transporter |
Protein accession | YP_002221046 |
Protein GI | 198284725 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC CTTTCGGCGA ATTACAGCCG GCGGTGACGG GCTGCGCCCA CTTCGCGCCG ACCTGGACCC TGTTTTACAA GGAATCGCTG CGCTTCAGCA AGGTCTGGCT GCAAACCATC GCCGCGCCCC TGATTACCAC CATCCTCTAC CTGGTGGTTT TCGGGAACGC CCTGGGCGGT CGCGTTTCCG TCTATCCGGG GGTCAGCTAC ACGGCGTTCA TCGTCCCCGG CCTGATGATG ATGTCGGTCC TGCAAAATGC CTTCGCCAAC AGTTCTTCCA GCCTGATCCA GTCCAAGGTG ACGGGCAATA TCGTTTTTCT GCTGCTCAGT CCGCTCAGCC CCACCGAGAT TTTCGTGGCC ATGGTTGCCG CATCGGTGCT GCGGGGGGCA TTGGTAGGTC TGGCTATTTT GGCCCTGGCG TTGATCTTCC TGCACATTCC ATTGCTGCAC CCCTTGTGGA TCATCCTGTT TACTCTCCTG GGCGCTAGCG GTATGGGCGC GCTGGGTCTG GTCGCCGGGC TCTGGGCAGA AAAATTTGAT CAGATTGCCG GTTTTCAGAA TTTTGTCATC ATGCCGCTGA CCTTTCTCGC CGGGGTATTT TACTCGGTAC AGTCCCTGCC CGGCGCATGG CGGCAGCTAT CCCTGTTCAA CCCGTTTTTT TATATCATCG ATGGGTTTCG CTATGGTTTT TTTGCAGATT CCGACGTGAG CGTCTGGGCC TGCCTGGGCG TCGGCATCGC CTTCGCGGGC GGGACCGGTC TCCTTGCCTG GCGCCTGCTG GCGCGTGGTT ACAAATTGCG CCAGTAG
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Protein sequence | MPEPFGELQP AVTGCAHFAP TWTLFYKESL RFSKVWLQTI AAPLITTILY LVVFGNALGG RVSVYPGVSY TAFIVPGLMM MSVLQNAFAN SSSSLIQSKV TGNIVFLLLS PLSPTEIFVA MVAASVLRGA LVGLAILALA LIFLHIPLLH PLWIILFTLL GASGMGALGL VAGLWAEKFD QIAGFQNFVI MPLTFLAGVF YSVQSLPGAW RQLSLFNPFF YIIDGFRYGF FADSDVSVWA CLGVGIAFAG GTGLLAWRLL ARGYKLRQ
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