Gene Lferr_2645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2645 
Symbol 
ID6878644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2627961 
End bp2628767 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content59% 
IMG OID642790502 
ProductABC-2 type transporter 
Protein accessionYP_002221046 
Protein GI198284725 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC CTTTCGGCGA ATTACAGCCG GCGGTGACGG GCTGCGCCCA CTTCGCGCCG 
ACCTGGACCC TGTTTTACAA GGAATCGCTG CGCTTCAGCA AGGTCTGGCT GCAAACCATC
GCCGCGCCCC TGATTACCAC CATCCTCTAC CTGGTGGTTT TCGGGAACGC CCTGGGCGGT
CGCGTTTCCG TCTATCCGGG GGTCAGCTAC ACGGCGTTCA TCGTCCCCGG CCTGATGATG
ATGTCGGTCC TGCAAAATGC CTTCGCCAAC AGTTCTTCCA GCCTGATCCA GTCCAAGGTG
ACGGGCAATA TCGTTTTTCT GCTGCTCAGT CCGCTCAGCC CCACCGAGAT TTTCGTGGCC
ATGGTTGCCG CATCGGTGCT GCGGGGGGCA TTGGTAGGTC TGGCTATTTT GGCCCTGGCG
TTGATCTTCC TGCACATTCC ATTGCTGCAC CCCTTGTGGA TCATCCTGTT TACTCTCCTG
GGCGCTAGCG GTATGGGCGC GCTGGGTCTG GTCGCCGGGC TCTGGGCAGA AAAATTTGAT
CAGATTGCCG GTTTTCAGAA TTTTGTCATC ATGCCGCTGA CCTTTCTCGC CGGGGTATTT
TACTCGGTAC AGTCCCTGCC CGGCGCATGG CGGCAGCTAT CCCTGTTCAA CCCGTTTTTT
TATATCATCG ATGGGTTTCG CTATGGTTTT TTTGCAGATT CCGACGTGAG CGTCTGGGCC
TGCCTGGGCG TCGGCATCGC CTTCGCGGGC GGGACCGGTC TCCTTGCCTG GCGCCTGCTG
GCGCGTGGTT ACAAATTGCG CCAGTAG
 
Protein sequence
MPEPFGELQP AVTGCAHFAP TWTLFYKESL RFSKVWLQTI AAPLITTILY LVVFGNALGG 
RVSVYPGVSY TAFIVPGLMM MSVLQNAFAN SSSSLIQSKV TGNIVFLLLS PLSPTEIFVA
MVAASVLRGA LVGLAILALA LIFLHIPLLH PLWIILFTLL GASGMGALGL VAGLWAEKFD
QIAGFQNFVI MPLTFLAGVF YSVQSLPGAW RQLSLFNPFF YIIDGFRYGF FADSDVSVWA
CLGVGIAFAG GTGLLAWRLL ARGYKLRQ