Gene Lferr_2644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2644 
Symbol 
ID6878643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2626535 
End bp2627968 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content63% 
IMG OID642790501 
ProductSurA domain 
Protein accessionYP_002221045 
Protein GI198284724 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCA AACGCCGTCC TATCCTACTC GCCCTGGGTA TCGCCCTGGG GGCCGCTCCG 
GTTCTGGCCT GGGCGACCAC ACCTTTTCTC AACCGCGACA CGCTGCTGCC GGCCACGCCG
GCGATGTCGC CCCTTACGAC AACCCATACC TATTCGGAAC GCTCTGCGGA AGCACCGGCG
GTGGCACCGC TCCCCCAGAA CACCCAGAAT CTGGACAAGG TCGTTGCGGT GGTGAACGAC
AATATCATCA CCTCCATGCA ACTGGAGCAA CGGGTTGGCG CCGTACGGGC CCGCCTGCAG
ACACAAAACC CAAACGCCAT GCCCCCCGAA GACATCCTGC GCCGCCAGGT GCTGCAGCAG
ATGATCCTCC AGGATATCGA ACTGCAGATT GCGCACCGCG CCGGAATCAA GGTGGACAAG
GCCACGCTGG ATCAGGCCAT CAGCAACCTC GCCCAGGCCA ACCACCTCAC CCCTGACCAG
TTACGCCAGG CGCTGGCCAA CCAGGGACAG TCGTGGGAGC GCTTCACCCA TGACCTCGAG
GATCGCATTC TTGTAGATCG CCTCATGCAG CAGGAAGTGG AGAACCGGGT CCACATAGGA
CCCGATGAGG TGAAAACCTT CGCGCAACAG CTCAAGGAAA TGGGTGGCGT GAGTTTCGAC
CTGCAGCAGA TATTCATCCC GTTGCCGGAC AACCCGACGC CGGACGCCGT TGGCGCAGCA
CGGCGTGATG CCGAACAGGC GCGCGATCAT GTGCTGGCGG GCGAGAGATT TGGGCGCGTT
GCCACACAGG TCAGCAGCGG CCGCGATGCC CTGCAAGGCG GCCGCCTCGG CTGGATCAAG
GCGGGCGAAC TGCCTCCGGC AGTGGCCCAG ACACTCCTCC AGTTGAAGGT GGGCGAAATC
AGTCCCGTCA TCCCCGGACC CACCGGCTTT CATATTTTCA AGTTGCTGGA TGTCAAACAC
GGTCAGCCGA CGGTCACCGA GGTCAAGACC GCCATGATCG TCCTGCGTGC CGGCAACAGC
CTGCAACTGC AGGAAGCCGA GGCGCGCGCT CAGGATATCC AGCAGGCATT GCAAAGCGGT
ACCCGCTTCT CTGAACTCGC GCGTAGCTAT AGCCAGGACC CGCGCACCGC CGCCAACGGC
GGCGAAATGG GCTGGGTCGC TCCCGGGCAG TTGCCGGACA GTCTTGAACG CACCCTGCTC
ACCCTGCAAC CCGGCGGAGT CAGCAGCCCC ATCCGCGTAG GGAATGCGAT TTATATTCTG
CACTCCCAGG CTCAGCGCCA GCAGGCGGTT GAAGAGAAAC AGATCATGGC GGCCGCGCGT
ATGCAACTCT ACAACCGCAT CGTCCACGAG CGCATGGACG AGTGGCAGCG CCGCATCCGC
GACGGAGCCT ATGTCGAGGT ACTCGAGCCC GGCCTGCGCA GCAGCGATGC CTGA
 
Protein sequence
MSLKRRPILL ALGIALGAAP VLAWATTPFL NRDTLLPATP AMSPLTTTHT YSERSAEAPA 
VAPLPQNTQN LDKVVAVVND NIITSMQLEQ RVGAVRARLQ TQNPNAMPPE DILRRQVLQQ
MILQDIELQI AHRAGIKVDK ATLDQAISNL AQANHLTPDQ LRQALANQGQ SWERFTHDLE
DRILVDRLMQ QEVENRVHIG PDEVKTFAQQ LKEMGGVSFD LQQIFIPLPD NPTPDAVGAA
RRDAEQARDH VLAGERFGRV ATQVSSGRDA LQGGRLGWIK AGELPPAVAQ TLLQLKVGEI
SPVIPGPTGF HIFKLLDVKH GQPTVTEVKT AMIVLRAGNS LQLQEAEARA QDIQQALQSG
TRFSELARSY SQDPRTAANG GEMGWVAPGQ LPDSLERTLL TLQPGGVSSP IRVGNAIYIL
HSQAQRQQAV EEKQIMAAAR MQLYNRIVHE RMDEWQRRIR DGAYVEVLEP GLRSSDA