Gene Lferr_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2641 
Symbol 
ID6878640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2622632 
End bp2623321 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID642790498 
ProductNucleotidyl transferase 
Protein accessionYP_002221042 
Protein GI198284721 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.782296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCC CCATCACCCG TGCGATGATA CTGGCCGCAG GTCGGGGTGA GCGGCTCCGG 
CCTCTCACCG ATCATGTCCC CAAGCCCCTG CTGGAAGTTG CGGGTAAGCC GCTCATCGTG
CGTCACCTGG AGTCATTGCT TGAGGCCGGC ATTCAGGATG TTATCATTAA CGTCGGTTAT
CTGGGCGACG CCATCATGCA AGCTCTGGGT ACGGACTGGC GGGGACTGCG GATCCATTAC
AGCGACGAGC GCGGGGGCCG TCTGGAGACG GGGGGTGCCA TTGTCCGTGC CTTGCCTTTA
TTGGGGGACG CGCCTTTTTT GCTGGTGAAC GGTGATATTT GCACGGACTT TCCCTGGACC
CGTCTCTGTC AGCCTTCTTC CGCGCGTGCG CATCTGGTGC TGGTGCCCAA CCCGGTCCAG
CACCCGCAGG GAGATTTTGC GTTGTCCGCC AGCGTGGTGG CTTTGGCGGG CGAAGAGCGT
CATACTTACG CGGGTATCGC CCGTCTCGAC CCAGAGCTGT TTCGGGAGTT TCCCGAGCAG
CCGGCCCCTC TGGCGCCTTG GCTGCGGCGG TGGATTGCGG CGGGTCTGGT GGAGGGAAGT
TTGTATCAGG GAAAGTGGAC GGATGTCGGC ACACCGGAGC GGTTGCGGAT AGCTGAGCGT
GATTGCGCAG AGGTCCCCGG TGGACTTTGA
 
Protein sequence
MAAPITRAMI LAAGRGERLR PLTDHVPKPL LEVAGKPLIV RHLESLLEAG IQDVIINVGY 
LGDAIMQALG TDWRGLRIHY SDERGGRLET GGAIVRALPL LGDAPFLLVN GDICTDFPWT
RLCQPSSARA HLVLVPNPVQ HPQGDFALSA SVVALAGEER HTYAGIARLD PELFREFPEQ
PAPLAPWLRR WIAAGLVEGS LYQGKWTDVG TPERLRIAER DCAEVPGGL