Gene Lferr_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2632 
Symbol 
ID6878631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2616629 
End bp2616970 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content55% 
IMG OID642790489 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_002221033 
Protein GI198284712 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.818318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTA CCATTACCGG GCAGCACCTG GATTTGACGG ATTCCATCAA AAACTATGCC 
GATGAAAAGA TCGGGCGCCT TGGCCGTTAC TTCGATCACG TCAGCAACGC TCAGGTGGTG
CTAAAGCACC TCCCCCACGA AAAACTGAGC AACGTCGTGG ACATTACGGT CAATGCTCCG
GGGCACGTCT TCCATGCGGA GGTGCATGAT GCCGATATGT ACACGGGCAT AGATCTGGTG
GCCGACAAGC TGGAGGCGCA GGTGCGCAGT TACAAGGAAA AACTGCAGGA TCGACGTAAT
GACCAACCCG CCGGTTTGGC GGCCATTGTT GAAGCCGACT GA
 
Protein sequence
MQITITGQHL DLTDSIKNYA DEKIGRLGRY FDHVSNAQVV LKHLPHEKLS NVVDITVNAP 
GHVFHAEVHD ADMYTGIDLV ADKLEAQVRS YKEKLQDRRN DQPAGLAAIV EAD