Gene Lferr_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2614 
Symbol 
ID6878613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2592782 
End bp2593180 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID642790471 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002221015 
Protein GI198284694 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGC GTCGAAGAAG CAGCAAAAAG GGTCGCGTCG AAATCATTCC GATGATTGAC 
GTAATGTTAT TCTTGCTTGT TTTTTTTATT ATGATCACTT TGCAAATGAT CACCGATAAA
GGCATCAAAC TGCAACTGCC CACTTCCAGC ACGGCCAAAG AACTGCCTCA TCCGCATTTC
GTCATCAATA TCGAAAAATC CGGCAAGGTC ATTGTCAAAG GCAAACAAAT GACCCTGGAC
GAGTTACAGG GTTTTCTCAG TGCCGACGGT GATGTGGAAC ATACACAAGT GACTATCGCA
GCAGATAAAG TGGTTCCATT CCAACAATTC GTGCATGTTA TGGACACCTG TCAAAAAGCC
GGAGTCACTC AAATTGGTAT AGCCACCAAG GCGACCTGA
 
Protein sequence
MIPRRRSSKK GRVEIIPMID VMLFLLVFFI MITLQMITDK GIKLQLPTSS TAKELPHPHF 
VINIEKSGKV IVKGKQMTLD ELQGFLSADG DVEHTQVTIA ADKVVPFQQF VHVMDTCQKA
GVTQIGIATK AT