Gene Lferr_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2613 
Symbol 
ID6878612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2592103 
End bp2592750 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID642790470 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002221014 
Protein GI198284693 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCC AATATATCAT TCATCTCGCC AACTACTCGG ATGGCGTGCT TTATGTCTTA 
GCCCTCCTGT TTCTGATTGA ACTGGCGGTC ATTTTTGATC GTGCGTGGTT CATGCGCTCG
GCCTTACGCA AGGGTAAGAC CATCATTCAT AAACTCTCAG AGGTGGGCAA ACTGACCAGT
GAACAACTGG AAGAATTGAT GCAAGAGGCA AAAGGTCAAC CCGAAGAGCA AATCATCACT
GCAGCATATC GTCACATGGA TCTGGTTCAC CATTATGGCA GTGCCCGTGG AGAAGCCTTT
GATAATCGGC TTGACGAAGC TATTTTCCTG ACAACGCCTT TCCTGGACAA GCGTTTGTGG
ATTCTTGATA CTACGGTGAC TTTGGCGCCT CTTTTAGGGC TGTTCGGAAC GATTCTCGGT
ATGTTCCACG CTTTTTCCAT TTTGGCGACC CCAGGGCATG CACCTACTCA GGTTACGGGT
GGTGTGGCGG ATGCCCTCAT TGCTACCGCA TCCGGTTTGT TTATTGCCAT GGTTGGTCTG
ATTACTTTCA ATGCATTTAA CAACGCCATT GATAAAACTA TACAACAGCT CGAATCGATC
AAGTTGCTGC TGATCAATCG TCTGGACGGG GCACCCAACA AGATTTGA
 
Protein sequence
MSFQYIIHLA NYSDGVLYVL ALLFLIELAV IFDRAWFMRS ALRKGKTIIH KLSEVGKLTS 
EQLEELMQEA KGQPEEQIIT AAYRHMDLVH HYGSARGEAF DNRLDEAIFL TTPFLDKRLW
ILDTTVTLAP LLGLFGTILG MFHAFSILAT PGHAPTQVTG GVADALIATA SGLFIAMVGL
ITFNAFNNAI DKTIQQLESI KLLLINRLDG APNKI