Gene Lferr_2609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2609 
Symbol 
ID6878608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2589278 
End bp2589952 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID642790466 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_002221010 
Protein GI198284689 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGGGT TACATTTCAG AATACCCGAT GATGAGATTT TTTTGAATTC CAGCAATATA 
GAAATATTCA TACAAACTCT GGTGACCCTG CTTGTTCTGA TGGATCCCAT CGGCATTGTT
CCTATATTTG TGTCACTTAC CAGGGAGCAA AGCACTGATC AACAAAAGAC GACCGCAAAG
TACATTTCTA TTGTCGTCGC TTTGGTGCTT ATTATTAGCA CGTTATTTGG CAATGATATT
CTTCGCTATT TTTATATTGG CATTGCCGAA TTCAACGTCA GCGGCGGGCT ATTGCTTTTA
CTCATGTCCA TCCAAATGTT GACTACCGAT AATATCAGCA CCACTTTTGG GCAAGGCCAA
GCCAGCGCTT ACCACGGCGG GCGACTGGTA ACACCGCTAG GCATCCCTTT TCTGGCTGGA
CCAGGAGCTA TTGGCACTGT CATTATTTAT GGACAACACG CCCACACCAT CTTGAGTTAC
GGGCTTATAC TGATTGACGT GCTTATCGCT TCCTTTGCCG CTTACATCGC CATGCACAAT
GCGCATCATA TTTCCCGGTT TTTTGGTGAA ATAGGCATTG AAATCATTAC TAAAGTTGCC
GGCCTCATTC TGGGCGCAAT AGCTGTTCGT TTTATCTGTC AGGGTCTGAT CCGTTTATTG
CCTGGCCTTA ACTAA
 
Protein sequence
MPGLHFRIPD DEIFLNSSNI EIFIQTLVTL LVLMDPIGIV PIFVSLTREQ STDQQKTTAK 
YISIVVALVL IISTLFGNDI LRYFYIGIAE FNVSGGLLLL LMSIQMLTTD NISTTFGQGQ
ASAYHGGRLV TPLGIPFLAG PGAIGTVIIY GQHAHTILSY GLILIDVLIA SFAAYIAMHN
AHHISRFFGE IGIEIITKVA GLILGAIAVR FICQGLIRLL PGLN