| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2608 |
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| Symbol | |
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| ID | 6878607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2586764 |
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| End bp | 2589238 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642790465 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002221009 |
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| Protein GI | 198284688 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAA AGCCCAGCAA TCCTCCCGTC ACGGTGACAC ATGCAGACCA TCGTGTGCCC
AAGGTCAGCA GATTATTGTT TACGGCCATC CTGTTCGCTC TTTATCCGGC CCTCGACGCT
GTTGCTTATG CATCTACCGC AAACAATTCT GACGTATCCA AAAGCACCCC CACTGAAAAA
GTCGTCAAAC TGCGGGAAAT AAAAAAGAAA TACGAGAAGA TATTGGTCGG TGAGCGCAAT
ATCGCCTCCG CCATGTCCGT CATTGGTCCC GACCAGATCA AACATTCCAG TTCGGCGGAA
AGCATATACA GCCTTTTGAA ACAAACCCCT TCGGTCAATG AATACCAACA GAATATTGGT
CCGGGTACAC CAGTGATGAC CGTACGTGGG GTGCGCATGA GTCAACTTGC CCAAACCCTG
GACGGGATTC CCATGACAGA CCTGTTGTCT GGTGGACAAG GTGCTTATCT GAGCAATAAT
ATCGGCACGG TCATCAGTAA TGGACAGATA TCTGGGATTC ATGTATATCC CGGTGTTGCT
CCTCCTGATC GTGGAGGCTT TGCGACTGTA GGAGGAACCG TTTCCTATAC CACCAAAACC
CCACCGAAGA AACGCTACGC CGACATATTC ACCAAGGTGG GATCGTTTTC AACGGATACC
TATGGTTTTG ACGCCAGTTC CGGGAAAATT CCCGGCACGG ATGGTCTTCG CGTGTATACC
CGCTTGAGCC AGACCCAGAC CGACGGCTAC ATTCAAAATA CGCCCGCCCG TTATACGGAT
TTTCTGTTTA CCGCTATCAA GCCTTATGAC TACGGCCTCT CCAAAGTTAC TGGTACAGTC
ATTTATAATA CCGCACATGG CTATATGATT AGCGCTCCCA ATGCAGTGGC GCAATTAGAT
AAGTACGGAA TTTTTTATAA CTATCCCTTG TCAGAAGCGA GTACTTTGCA GAGGAACCAG
TACCTGACTG CGATATTAGG TGACAGCACC TATATCAATA GTCACCTGGT CATTGGCGCC
AAGGCGTTTT ATATTCACAA ACATAGCTAT TTGGCTGGCT ATTTGGCGCC AAATTTGATT
AGCGAGTCAT ATCCATATCA GGTGAATTTT AATAATCCTT ATTCAGGATA TGGGCCACTA
CCCCCAACTG CCGCGAGCCC TGGTGTCATT CCTCATACAT ATGATCCTGT GGCCATGTTT
GGCAGTTATC CTGCCGGTGA AGCGGCGCAA ATCAATATCA GTGGGAACAC CACAATTGGC
ATAGCGCCAA AAGTAAACAT CTTTATTCCA CACAACGATA TCACCATAGG CGGCCTGGTG
GCTCAGGAAA CTGCGGGTCC GGGAGGAGGT AACTATTTTT ATGGAACATT GGATATGCCT
AAAATTTATG GATATAATTC CTACGGGAAC CCGTCAAGTC CAACCAATAA CAAACAACAG
CGAACCATTT ATAGCGGGTA CCTGTCAGAC AAAATAAATC TGCTCAATAA TAAGCTGCAT
ATTGAACCCG GTGTAACTAT AACCGGCGTA AGTACCAGCA ACTACGTTCC CGTCAACCAG
TATGGAACAC CACCACAAGC CTATACTCTT TCTAATTATG ATAAAGAGGT GCTCCCCTAT
TTAGGTCTAT CCTATGATGT CACGAACAAG GTCATCGCTT ATGCCAGTTA TGGCAAGGGT
GCTCGCTTTG CCCCGGTAGC TGACTATATT TTGGGTCCAT CCGGAAGTAC AACTCTTGCT
CCTGGACCTG AAACCGTCAA TGCGTATGAA ACAGGACTGC GATATGTAGG CAAGCATCTT
TATCTGAATT TCGATGGTTT TTTGCAAAAT ATGCACGGAA TGTTCTCCTT TTATACAAAC
TACCTTACTG GTTACTCGCA GTACGCCAAC ATCGGCGAAG AGCAGATGAA AGGTCTGGAG
TTTTCCGGCA AGTATGAGCT CAATCCCGAG TGGACGATTT CCGGTCATGT CTCCTATACA
AACGCTCAAT ACATGAATAG TTTTTCCGCC ACTGTAACGC CATTTGAAGG ACAGTATGGT
TATGTTTTTG CGGGGAATCC ATTAGCGTCT GTTCCTAATT GGCTTGCGGG ATTACGTCTG
GGTTATCACA ATCATAACTT CCATGCCGCT CTGATGGAGA GTTACACCGG GCCCCAGGTT
ACCACTTACG ACTTACCACC GACAGAGTCC AATCCACTGC TGCAGGATGC GACCACGCCC
AATCCCGGAG TAAAGCTCGC CCCTTACTTC CTGACGAACC TCCAGGCCAG TTACAGGGTT
CCTATTCATC AGGATCATTT GTCCTCCATA ACCGTCAGCC TGAATATCGA TAACCTTTTG
GATAATCACT ACTATCTGCA TTACTACCAG GCCTATAAAG AGTACGCCTT TGCCGGTGTT
GGCAATCCTT ACGCGGAAGC TTACCCCGGC ATGCCCCGCT TTATTGAAGT TGGTCTGTCC
GGACGCTTTT CCTAA
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| Protein sequence | MPSKPSNPPV TVTHADHRVP KVSRLLFTAI LFALYPALDA VAYASTANNS DVSKSTPTEK
VVKLREIKKK YEKILVGERN IASAMSVIGP DQIKHSSSAE SIYSLLKQTP SVNEYQQNIG
PGTPVMTVRG VRMSQLAQTL DGIPMTDLLS GGQGAYLSNN IGTVISNGQI SGIHVYPGVA
PPDRGGFATV GGTVSYTTKT PPKKRYADIF TKVGSFSTDT YGFDASSGKI PGTDGLRVYT
RLSQTQTDGY IQNTPARYTD FLFTAIKPYD YGLSKVTGTV IYNTAHGYMI SAPNAVAQLD
KYGIFYNYPL SEASTLQRNQ YLTAILGDST YINSHLVIGA KAFYIHKHSY LAGYLAPNLI
SESYPYQVNF NNPYSGYGPL PPTAASPGVI PHTYDPVAMF GSYPAGEAAQ INISGNTTIG
IAPKVNIFIP HNDITIGGLV AQETAGPGGG NYFYGTLDMP KIYGYNSYGN PSSPTNNKQQ
RTIYSGYLSD KINLLNNKLH IEPGVTITGV STSNYVPVNQ YGTPPQAYTL SNYDKEVLPY
LGLSYDVTNK VIAYASYGKG ARFAPVADYI LGPSGSTTLA PGPETVNAYE TGLRYVGKHL
YLNFDGFLQN MHGMFSFYTN YLTGYSQYAN IGEEQMKGLE FSGKYELNPE WTISGHVSYT
NAQYMNSFSA TVTPFEGQYG YVFAGNPLAS VPNWLAGLRL GYHNHNFHAA LMESYTGPQV
TTYDLPPTES NPLLQDATTP NPGVKLAPYF LTNLQASYRV PIHQDHLSSI TVSLNIDNLL
DNHYYLHYYQ AYKEYAFAGV GNPYAEAYPG MPRFIEVGLS GRFS
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