Gene Lferr_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2607 
Symbol 
ID6878606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2583916 
End bp2585859 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content50% 
IMG OID642790464 
Producthypothetical protein 
Protein accessionYP_002221008 
Protein GI198284687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGGT ATCGTTTACG AAAAGGTGTT ATCTCAGGTG TTTTTGGCTT GCTGCTGAGC 
GCTAGCGGAC TTGTTGCAGA GGCAAGTCCT GTAGGTTTTG TCCCGGTTGA TACAGCCGCC
AGCGGCGCCA TGACCCGTCA ATTGTCTTAC CATGCGGTGG TTAAGGTAGC CGCAAATGGA
ACTTACACGG ATCAGGTCAG CCAAAGCATC CTGCTACGTA ACCTCAAGGG TGAAAGCAAG
ATTAACCCCT ACAGCGAGAC TTATTCTTCA TCGCTTTCAA GCCTTAAGGT GGTCAAAGCA
TGGGTGGCAA CTCCATCTGG AAAGCAAATC CTTATCCCCG CGGCCGATAT ATTTGTGCGG
CCGATTCCAG TGGCACAGGG CGCACCGATG TATAGTCATT CCAAAGTGCT AGGCATTGTT
CCGCCCAAGA TCGCTGTCGG TGATGTACTG CATATTGTTA CGGAAAAGCA TTTTTTTAAA
CCGTATTTTC CCAATGCGTA TTCGAATTAT TGGGAAATTC CCCAGAGCCG GTCTGTTCGA
GATGAAACCA TAAAAATAGA AGCCCCGGTT TCCATGCATC TTCGGGCAGC ACAGCGTGGT
GGTTGGGAGA TTCGTCATTC CATAGAAGGC GGTACGGAAA TAATCCACGC GCGCATGGCG
ATCCATCATG CAGAATATTC CGGCATGGAG ACGGTGGGGG AACGTCAGTT CAGCCCGATC
TTTGAAGTAA CCAGTTTCCC AACTTGGGCG GCGGTGGGTA CTGCCTATTG GGCCAGAGCG
AACAAAATGG CAAAAGTGAC CCCTTTGGTG CGGAAAGTGG CGGATATGGC TTCTGGAAAA
CGCACCGGTT GGACCTCACA GAAGGCCTTG TTTTCTTGGG ATTCTGCAAA CATCCGTTAT
GTGGGGCTGG AGCTGGGCGT GGGAGGCTTT GTGCCTATCG CTGCGAATAA AACCCTGGAA
ACCGGTTACG GAGACTGCAA GGCGCATTCC ACATTGTTAC AAGCCCTGTT CAATGCCAAG
GGATTCAAGC TATATCCAGT CATGATGAAT TGGAACAATG TGTACAATCT CCCGCCGTTA
CCGACTCCTT TCTGGTTTAA CCATGCTATT GATTATGCTC CTAAAAGACA TATGTTTCTG
GATAGCACCG GTCAATATGA AACGCCGGGA CAACTGGCCG TCGGAGAGAG GGATAAACCT
ACGGTGGTGA CCGGACCTCA TCCACGAATT GTGATGACCC CTGGTGCTGA GCCGGAACAA
AATCAGTTTG TATACACGGC CAACCTCCGT CTGCATAGCA ATGGTACTTT GAGAGGGTCT
GGGGAAATGA CCAGCAAAGG ATGGTGGGCG TGGGCGTACC GTGAGATTTT TGCTTCCGTT
CCGCCATCAC ACTACGCCAC TGTAATGAGT ATGCTTCTTG CTCCGAGTGG GGGAGGCAGT
GGTACCTTCT TCCCTGGTGA TCCTACTATT TTGGATAAGC CGTTCAAGGT TGACGCGAAA
TGGTCCACGC CGGATTTTGC GAAGGTCGGT CGGCATCTGA GTTTTCCTGT TCCGCCAGGG
CCTTTCCTGG TGCCCGGCTT GTCGGCTGCG CCCAACCCCA TTGCCTATCT GGCGGAAGTT
GCCGGGCCGA ACGCGCGCAG GCATAGCGTA GAGACTTATC TGGGCGGCCT GATCTGGACG
ACTAAAATAC ATATTCCTTC GAGTTACGAG GCGGTATTCT TACCTCCCAA TCAGGATATT
CGGAATGCGG GAGGTAGTTT TTCTTATAAA ATTCAATATC ATCATGATAT GCTTCTGGTG
CATTACCATC TGAAGCTGAA TCGCGTGGTT TATAATCCAG AACAATATCC CGCTTTGCGC
GCATTACTTT TGGCAGATCT GTCCGCTCAG AAAAGCCAGC TGATTTTCGC CCGCAAAAAA
GAGAGGAACG CATATAATGA TTAA
 
Protein sequence
MHRYRLRKGV ISGVFGLLLS ASGLVAEASP VGFVPVDTAA SGAMTRQLSY HAVVKVAANG 
TYTDQVSQSI LLRNLKGESK INPYSETYSS SLSSLKVVKA WVATPSGKQI LIPAADIFVR
PIPVAQGAPM YSHSKVLGIV PPKIAVGDVL HIVTEKHFFK PYFPNAYSNY WEIPQSRSVR
DETIKIEAPV SMHLRAAQRG GWEIRHSIEG GTEIIHARMA IHHAEYSGME TVGERQFSPI
FEVTSFPTWA AVGTAYWARA NKMAKVTPLV RKVADMASGK RTGWTSQKAL FSWDSANIRY
VGLELGVGGF VPIAANKTLE TGYGDCKAHS TLLQALFNAK GFKLYPVMMN WNNVYNLPPL
PTPFWFNHAI DYAPKRHMFL DSTGQYETPG QLAVGERDKP TVVTGPHPRI VMTPGAEPEQ
NQFVYTANLR LHSNGTLRGS GEMTSKGWWA WAYREIFASV PPSHYATVMS MLLAPSGGGS
GTFFPGDPTI LDKPFKVDAK WSTPDFAKVG RHLSFPVPPG PFLVPGLSAA PNPIAYLAEV
AGPNARRHSV ETYLGGLIWT TKIHIPSSYE AVFLPPNQDI RNAGGSFSYK IQYHHDMLLV
HYHLKLNRVV YNPEQYPALR ALLLADLSAQ KSQLIFARKK ERNAYND