| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2594 |
|---|
| Symbol | |
|---|
| ID | 6878593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2569964 |
|---|
| End bp | 2570782 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790451 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002220995 |
|---|
| Protein GI | 198284674 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGATG CCAACTTTTA TCGTGCCTTT GAAGACCGCC ACCGGGGCAC GCGGGACCTG
ATCAAATCCC GCGTGCGGGC GTATCTGCCT TTCATTACGC CTTTGCTGAA GCTCTATGGC
GAGGGCGCCG TGCTGGACAT GGGTTGCGGG CGCGGGGAGT GGCTGGAACT CATGGGCGAA
GAGGGATTCA CCGCCCATGG CGTCGATCTG GACGCGGCTA TGCTGGCAGC TTGTCAGGAG
CTCGGGCTCT CCGTGGAGCA GGGCGATGCC CTGGAGGCAC TCAAGCGTCT GCCGGATGCC
AGCCAGTGCG TGGTCTCCGG TTTCCATATT GCCGAGCATG TGCCCTTCGC GGTGCTGCAG
GAAATGGTGG CGGAGGCACT GCGTGTGCTG AAACCGGCGG GGCTGCTGAT CCTGGAAACA
CCCAATGCGG AAAACCTCGT AGTCGGTGCT TCCAGCTTTT ATCTCGACCC TACCCATCAG
CGCCCTCTCC CGCCTTTGCT GCTGTCCTTT TTAACCGAGT ATGCCGGGTT CTCGCGCACC
AAAATCCTGC GGTTGCAGGA GTCATCGGAG CTAGCCGCGC ACAGTGCGCG CGTGACGTTG
CTGCAGGTGC TGGCGGGCGT CAGTCCCGAT TACGCCGTCG TTGCCCAGAA AACAGCTTCT
GCAGAGGAGC TGGCGCACTT CAGCGCGCCC TTTGAACAGG AATACGGCCT CACGCTGGCA
GCCTTGGCGG CGCGCTACGA AACGGATTTA CGGGCGGAGA TTTTGCGAGA ACTGAAGCCT
CCGCGCAAAA AGGCGGCAAG CGCCGCCCCC AAAAAATAG
|
|---|
| Protein sequence | MPDANFYRAF EDRHRGTRDL IKSRVRAYLP FITPLLKLYG EGAVLDMGCG RGEWLELMGE
EGFTAHGVDL DAAMLAACQE LGLSVEQGDA LEALKRLPDA SQCVVSGFHI AEHVPFAVLQ
EMVAEALRVL KPAGLLILET PNAENLVVGA SSFYLDPTHQ RPLPPLLLSF LTEYAGFSRT
KILRLQESSE LAAHSARVTL LQVLAGVSPD YAVVAQKTAS AEELAHFSAP FEQEYGLTLA
ALAARYETDL RAEILRELKP PRKKAASAAP KK
|
|---|
| |