Gene Lferr_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2587 
Symbol 
ID6878586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2562980 
End bp2563837 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content52% 
IMG OID642790444 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_002220988 
Protein GI198284667 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCTG ATACTATTGA CATGGAACGA ATTATTGCCA TCGCCAAAGA AGCCGGCGAT 
GCCATCATGG AAATTTATCA ACGGGATTTT ACGGTGGATT ACAAGGAGGA CTCCTCCCCC
CTCACGGATG CCGATCGTGC CGCACATGGG ATCATTCTCC ATGGCCTTCA TGCCCTTTAT
CCGGAGATTC CGTTTTTGTC GGAAGAGGGT GATGCCATTC CTTATGAGAT ACGGAAACAC
TGGGGCTTTT TCTGGCTGGT GGATCCCTTG GATGGTACAA AAGAGTTCAT CCGGAAAAAT
GGCGAATATA CCGTAAACAT CGCGCTGATC GAAAACAACA GGCCGGTGCT CGGTGTGGTT
TACGCCCCGG CGCTGGATCT CATGTACTAC GCAAAAGAGG GAGCAGGGGC ATGGCGCCAA
GATGCAGTAC AGGGGACCCA AAAGCTTCCG TTGCATGTCA ATGATAGTCG GGAACAGAAG
CTGACGGTGG TGGCGAGCAA ATCCCATCGA TCGCCCGAGA CGGAAGTCTA TATCGACGAG
CTTCGAAAAT CCACGCGGGA ACTCGAGGTC GTTTCGATTG GCAGTTCGCT CAAGATCTGC
CTCGTCGCCG AGGGGGATGC GGATTGTTAT CCCCGCTTGG GGCCAACCAT GGAATGGGAT
ACGGCGGCGG CCCAGATTAT TGCGACCGAA AGCGGCTGTA GAGTAGAGGC TGCCGCTGGC
GGACATAAAC TAATATATAA CAAAAAAGAT TTATTAAATC CCTATTTTGT TGTTGAAACA
GCGGTCGCCA TGTTTTGCAA CGGCCGGACG GTGGCAAACA CGAGAGGGTA TGAACATGAA
CCGACTTCTG ATCAATGA
 
Protein sequence
MIADTIDMER IIAIAKEAGD AIMEIYQRDF TVDYKEDSSP LTDADRAAHG IILHGLHALY 
PEIPFLSEEG DAIPYEIRKH WGFFWLVDPL DGTKEFIRKN GEYTVNIALI ENNRPVLGVV
YAPALDLMYY AKEGAGAWRQ DAVQGTQKLP LHVNDSREQK LTVVASKSHR SPETEVYIDE
LRKSTRELEV VSIGSSLKIC LVAEGDADCY PRLGPTMEWD TAAAQIIATE SGCRVEAAAG
GHKLIYNKKD LLNPYFVVET AVAMFCNGRT VANTRGYEHE PTSDQ