Gene Lferr_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2573 
Symbol 
ID6878572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2543797 
End bp2545269 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content62% 
IMG OID642790430 
Productmannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 
Protein accessionYP_002220974 
Protein GI198284653 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAG TGCCTGTGAT TTTGTCCGGC GGTACGGGTT CCCGCCTGTG GCCGCTCTCC 
CGCAAATCCT TTCCCAAACC TTTCGTCGCG TTGCCAGACG GCGAAAACCT CATTCAAAAA
ACCCTGCATC GCATCATCAA CCTGGGAGCC GAAGGCCCCA TCCTCACGGT CACCAACCGC
GACTACTATT TTCTGACGCG CGACACCTAT GCCGCCTGCG CCAAAACCCG CCATTGCAAG
ATACCGGACG CACACTACCT GCTGGAGCCG GAGGGCCGCA ACACCACCCC CGCCATGGCC
GCAGCGGCCC TCTGGGCGCG CGAGATGGAG GGGGATGACG CGGTTCTCCT CTTCCTCCCG
GCGGACCATC TCATCGCGGA CGAAGCGCGC TTCGGCGCCG CCGTACGGAG CGCGGCGGCC
CTGGCCGGGC AAGGTTACCT CGTCACCTTT GGCGTGACCC CCACCGCGCC GGAAACCGGC
TACGGCTACA TTCAGGCGGG CGAGTCACTG GGCGCGGGGC GCCAGGTCGT GCGCTTCGTC
GAAAAACCCA ATGCCGCAAC CGCCCGAGAC TATCTCACCA GCGGCGACTA CCTGTGGAAC
TCCGGCATGT TCTGCATGCA GGCGGGCAGC CTGCTGACGG CGCTGAAGGA CCATGCCCCC
GCCATCCTCG CCGCCGCCAG CGCCGCGACA GCCTCCGCCA CGCGCAACGG TGACACCTGG
GAGCTTGGTG AGGAATTTGC TGCAGCCCCG GACATCTCCA TCGACTACGC CGTCATGGAA
AAGGCCGCCA ACGTGGCGGT GGTGCGCGCC GACTTCGACT GGAACGACCT CGGCGCCTGG
ACCGGTTACA GCGCGCTGAT GCGGGAAGAC GAAAACGGCA ACCAGATCCA CGCCCACGAC
AGCCTCTTCA TCGATGCGCA GCGCTGCGTC GTGCATAGCC CGGACCGGCT GACCGCCGTA
CTCGGTCTGC GCGATGTGCT CATCATAGAC ACCCCGGATG CGCTATTGAT CGCCGACCGG
CGCCGGGATC AGGAAGTCAA AACCATCGTC GAACGCCTCA AAGCCCGCAA GCACGATAGC
GTGGATATTC ACACCACCGT CCACCGCCCC TGGGGCACCT ACACCACGCT GGAAGAGGGC
GACCGTTTCA AGATCAAGCG GATTGTCGTC AAGCCCGGTG AAAAGCTCTC GTTGCAGATG
CACCATCATC GCAGCGAACA CTGGATCGTG GTGAGCGGCA CCGCCAGAAT CGTCAACGGC
GATACCGAAA AGTTGATTCT AACCAACGAA TCCACCTATA TCCCGGCTGG TCATTGCCAT
CGCCTGGAAA ACCCCGGCAT GATCGACCTG GTGCTGATCG AAGTACAGAG CGGGGCTTAT
CTGGGGGAGG ACGATATTGT ACGGTTCGAC GATATTTATG GTCGCGCCCC GAAAAAAGCG
CCAGAATCTC CCGGAATGTC CATCACCGGT TAA
 
Protein sequence
MSLVPVILSG GTGSRLWPLS RKSFPKPFVA LPDGENLIQK TLHRIINLGA EGPILTVTNR 
DYYFLTRDTY AACAKTRHCK IPDAHYLLEP EGRNTTPAMA AAALWAREME GDDAVLLFLP
ADHLIADEAR FGAAVRSAAA LAGQGYLVTF GVTPTAPETG YGYIQAGESL GAGRQVVRFV
EKPNAATARD YLTSGDYLWN SGMFCMQAGS LLTALKDHAP AILAAASAAT ASATRNGDTW
ELGEEFAAAP DISIDYAVME KAANVAVVRA DFDWNDLGAW TGYSALMRED ENGNQIHAHD
SLFIDAQRCV VHSPDRLTAV LGLRDVLIID TPDALLIADR RRDQEVKTIV ERLKARKHDS
VDIHTTVHRP WGTYTTLEEG DRFKIKRIVV KPGEKLSLQM HHHRSEHWIV VSGTARIVNG
DTEKLILTNE STYIPAGHCH RLENPGMIDL VLIEVQSGAY LGEDDIVRFD DIYGRAPKKA
PESPGMSITG