Gene Lferr_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2551 
Symbol 
ID6878550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2522883 
End bp2525216 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content52% 
IMG OID642790408 
ProductTonB-dependent receptor 
Protein accessionYP_002220952 
Protein GI198284631 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0190132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.953315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG CTACCGGTGT AACCGCTCCC ACCACCTCGT CCAGTATTAG TGTCGGAGAA 
GTATCCTCTA CCACCGGCGC TTTAAACACG CTGGCTCATC TCCCCACCAA AAAACAGGTG
TTCAATTCCA CCCAGTCGGT AAAAGTCATC AATAGGCGTC AGATGGCTAC CGCAGGACCT
GCGGGTGGGG CGGCACAAGC GCTCGCCGTG GCACCGGGCA TCAATGTCGT CACCGATGGC
CCCAGTGGCG CGCCGCGCTC ATCGATCAGC ATCAACGGCA TGAAGACCGG CTGGGGCAAC
ATCGCAGGCA ATGCGAATGA TGGCACGGTC ATGGTCACTT TTGACGGCGT ACCCATGGTC
GATCCGGCTT ACGGCGTCTG GCAGGGCTCA GAGCTGCCCC AGATGTCCAT GATCAAGGGC
ATTACCGCAA CCTACGGCCC GGGCTATCCA CTGAATCGCT GGTACAACAA TATTGGCGGC
TCCGTTAATT TTTCGCCGCT GCAACCGACC AGGAAGGCCG GGGCATCCAT AGGCATGTAC
TATGGGAGTT TTGATTCCAA AGGTATCCAC TTCAATGTTC GCACCGGCGA ACACGATGGC
TGGTCAGGGA TCATTGCGGG TGGGGTAGGC AGCAGCGGAA ACTATTTGAA CGGGTATGGG
TTCAACAATC CCGGCAATAA TTATGCCTAT TATGGAAAAG TCCGGAAAAG CTTTCGTGGC
GGCCACATAA GTTTTGGTGG CTACGTTGCA CGTTCTGTGG CCTACAGACC ATTGCCAATC
CCGGTAACCG CCAATCCCAA TGTCACGATC TACGGGGTCG ACCCGAATAC CGGAGCCGTG
AATCCCGGGC CCATCTACAG TCAACAAACT ACGGGGTTTT ATACCACCCT CCCGTATTCC
GTTTACTGGA AGGAAGCTTT TGTAAAGACC TACCTCATTT ATTCTCGCTT CGAACAACAT
CTTACACCCA GCATGGTGAT CCATAACCTG TTATGGTATC GCTATGGCGA CCGCGTGCAT
CTGCACTACA ACAATACCGG CAATGCTGCC AACGTGCTGA ATCAGTATTA TAACGCCTCC
GACCATACCT ACGGGGACAA GCTTTATCTG ACCGTAAACG CACCATACAA CAATATTTCG
CTCGGCGGGT ATTTCCTGAA CTCGAAATAC AACTCCCTGT TGTATTTCTA TAATCAGAAC
CAGATTGCGA CTTATGATTC GCTCAGCCCC AATGCCGGAA ATAACGTAAT CATCAATGGT
TCTCCGGTAT ACAACAGCCC ATCCTTGCCG AGCGCATTCC ATAGTTCGTA TCTCTACATG
ACCGACCTTG CGGCCTTTGT CCAAGACGTC ATCCACCCTA TCCATGGTCT GCGCATTACC
CCCGGTATCC GCGTGGTTCA GTTTCAAACC AACTTTGTGA ACAACTCTGC TGCCCAATTC
CCCACGAGTG TGGCTAACCT GATCGGTCAC AACGGCGATT ATCAACCGAA CTCATCGACG
AATTTCACCG AGTTCGAGCC GTCCATCGGC GTCAACTATA AGGTGACGCC CAATGTTGCA
CTATATGGAA ACTACGCCAC CGGCTACAAG GCACCGGCCG GCGCTACCGG GACGTATGCT
CATGAATTGA CATCCACGTT ACAGCCGCAA AAGTCGACAC AGTACCAGAT TGGGGTAAAG
GCGTATGTCA AAAGTTATGG ACTGCTGCAT CACGCAGTCT TCAATGCCAA TTACTACCAT
CTGAATGATA CCAATGAAAT CATTCCCATC CCGGTTGTCA ACCATCTTTA CTCGCGCTTC
GCATCTGGTT CGTCGGTATT CAGCGGTGTC AATCTGTCGA TGGACGACAA TCCGCTCTAC
AATCTATACC TGTTCTCCAA CGTGAGTTTC GAGAAGGCCA CTTACTCAAA CTACACCACA
GGTCATGGCG TATCCTACGC TGGCCTGCCT ATTTCTAATG TGCCGGCGCA AACCGCCAAC
ATCGGCGCCT ACTATCAGAT TTATAATTCG GGCATCCTTT ATGAGCCAAG AGTCTGGTGG
CAGTATACCG GTGTCCAGAA CATCTACAAC AACAACACCG GAGCCCCCAC AAGTCAGAAG
TTGCCCAGTT TTGGGATATT CAATGCCTCG CTGCGGGTCA AGGTATCCAA AAGATATCTG
TTTGCCGGGA TGCATGATGC CTCGGTTAAT GTAACGGTCC TTAATCTTCT GAACAAGCAA
TACAACAATT ACGAGTATAT TTCGGGTGGC GGCTATTATG GCGTGGCCGG CCAGATACTT
GGGGAACCAG GTATGCCACG CGCAGTTTAT CTTAGTGTAA ACGCCTCATT CTAG
 
Protein sequence
MALATGVTAP TTSSSISVGE VSSTTGALNT LAHLPTKKQV FNSTQSVKVI NRRQMATAGP 
AGGAAQALAV APGINVVTDG PSGAPRSSIS INGMKTGWGN IAGNANDGTV MVTFDGVPMV
DPAYGVWQGS ELPQMSMIKG ITATYGPGYP LNRWYNNIGG SVNFSPLQPT RKAGASIGMY
YGSFDSKGIH FNVRTGEHDG WSGIIAGGVG SSGNYLNGYG FNNPGNNYAY YGKVRKSFRG
GHISFGGYVA RSVAYRPLPI PVTANPNVTI YGVDPNTGAV NPGPIYSQQT TGFYTTLPYS
VYWKEAFVKT YLIYSRFEQH LTPSMVIHNL LWYRYGDRVH LHYNNTGNAA NVLNQYYNAS
DHTYGDKLYL TVNAPYNNIS LGGYFLNSKY NSLLYFYNQN QIATYDSLSP NAGNNVIING
SPVYNSPSLP SAFHSSYLYM TDLAAFVQDV IHPIHGLRIT PGIRVVQFQT NFVNNSAAQF
PTSVANLIGH NGDYQPNSST NFTEFEPSIG VNYKVTPNVA LYGNYATGYK APAGATGTYA
HELTSTLQPQ KSTQYQIGVK AYVKSYGLLH HAVFNANYYH LNDTNEIIPI PVVNHLYSRF
ASGSSVFSGV NLSMDDNPLY NLYLFSNVSF EKATYSNYTT GHGVSYAGLP ISNVPAQTAN
IGAYYQIYNS GILYEPRVWW QYTGVQNIYN NNTGAPTSQK LPSFGIFNAS LRVKVSKRYL
FAGMHDASVN VTVLNLLNKQ YNNYEYISGG GYYGVAGQIL GEPGMPRAVY LSVNASF