Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2551 |
Symbol | |
ID | 6878550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2522883 |
End bp | 2525216 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642790408 |
Product | TonB-dependent receptor |
Protein accession | YP_002220952 |
Protein GI | 198284631 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0190132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.953315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTCG CTACCGGTGT AACCGCTCCC ACCACCTCGT CCAGTATTAG TGTCGGAGAA GTATCCTCTA CCACCGGCGC TTTAAACACG CTGGCTCATC TCCCCACCAA AAAACAGGTG TTCAATTCCA CCCAGTCGGT AAAAGTCATC AATAGGCGTC AGATGGCTAC CGCAGGACCT GCGGGTGGGG CGGCACAAGC GCTCGCCGTG GCACCGGGCA TCAATGTCGT CACCGATGGC CCCAGTGGCG CGCCGCGCTC ATCGATCAGC ATCAACGGCA TGAAGACCGG CTGGGGCAAC ATCGCAGGCA ATGCGAATGA TGGCACGGTC ATGGTCACTT TTGACGGCGT ACCCATGGTC GATCCGGCTT ACGGCGTCTG GCAGGGCTCA GAGCTGCCCC AGATGTCCAT GATCAAGGGC ATTACCGCAA CCTACGGCCC GGGCTATCCA CTGAATCGCT GGTACAACAA TATTGGCGGC TCCGTTAATT TTTCGCCGCT GCAACCGACC AGGAAGGCCG GGGCATCCAT AGGCATGTAC TATGGGAGTT TTGATTCCAA AGGTATCCAC TTCAATGTTC GCACCGGCGA ACACGATGGC TGGTCAGGGA TCATTGCGGG TGGGGTAGGC AGCAGCGGAA ACTATTTGAA CGGGTATGGG TTCAACAATC CCGGCAATAA TTATGCCTAT TATGGAAAAG TCCGGAAAAG CTTTCGTGGC GGCCACATAA GTTTTGGTGG CTACGTTGCA CGTTCTGTGG CCTACAGACC ATTGCCAATC CCGGTAACCG CCAATCCCAA TGTCACGATC TACGGGGTCG ACCCGAATAC CGGAGCCGTG AATCCCGGGC CCATCTACAG TCAACAAACT ACGGGGTTTT ATACCACCCT CCCGTATTCC GTTTACTGGA AGGAAGCTTT TGTAAAGACC TACCTCATTT ATTCTCGCTT CGAACAACAT CTTACACCCA GCATGGTGAT CCATAACCTG TTATGGTATC GCTATGGCGA CCGCGTGCAT CTGCACTACA ACAATACCGG CAATGCTGCC AACGTGCTGA ATCAGTATTA TAACGCCTCC GACCATACCT ACGGGGACAA GCTTTATCTG ACCGTAAACG CACCATACAA CAATATTTCG CTCGGCGGGT ATTTCCTGAA CTCGAAATAC AACTCCCTGT TGTATTTCTA TAATCAGAAC CAGATTGCGA CTTATGATTC GCTCAGCCCC AATGCCGGAA ATAACGTAAT CATCAATGGT TCTCCGGTAT ACAACAGCCC ATCCTTGCCG AGCGCATTCC ATAGTTCGTA TCTCTACATG ACCGACCTTG CGGCCTTTGT CCAAGACGTC ATCCACCCTA TCCATGGTCT GCGCATTACC CCCGGTATCC GCGTGGTTCA GTTTCAAACC AACTTTGTGA ACAACTCTGC TGCCCAATTC CCCACGAGTG TGGCTAACCT GATCGGTCAC AACGGCGATT ATCAACCGAA CTCATCGACG AATTTCACCG AGTTCGAGCC GTCCATCGGC GTCAACTATA AGGTGACGCC CAATGTTGCA CTATATGGAA ACTACGCCAC CGGCTACAAG GCACCGGCCG GCGCTACCGG GACGTATGCT CATGAATTGA CATCCACGTT ACAGCCGCAA AAGTCGACAC AGTACCAGAT TGGGGTAAAG GCGTATGTCA AAAGTTATGG ACTGCTGCAT CACGCAGTCT TCAATGCCAA TTACTACCAT CTGAATGATA CCAATGAAAT CATTCCCATC CCGGTTGTCA ACCATCTTTA CTCGCGCTTC GCATCTGGTT CGTCGGTATT CAGCGGTGTC AATCTGTCGA TGGACGACAA TCCGCTCTAC AATCTATACC TGTTCTCCAA CGTGAGTTTC GAGAAGGCCA CTTACTCAAA CTACACCACA GGTCATGGCG TATCCTACGC TGGCCTGCCT ATTTCTAATG TGCCGGCGCA AACCGCCAAC ATCGGCGCCT ACTATCAGAT TTATAATTCG GGCATCCTTT ATGAGCCAAG AGTCTGGTGG CAGTATACCG GTGTCCAGAA CATCTACAAC AACAACACCG GAGCCCCCAC AAGTCAGAAG TTGCCCAGTT TTGGGATATT CAATGCCTCG CTGCGGGTCA AGGTATCCAA AAGATATCTG TTTGCCGGGA TGCATGATGC CTCGGTTAAT GTAACGGTCC TTAATCTTCT GAACAAGCAA TACAACAATT ACGAGTATAT TTCGGGTGGC GGCTATTATG GCGTGGCCGG CCAGATACTT GGGGAACCAG GTATGCCACG CGCAGTTTAT CTTAGTGTAA ACGCCTCATT CTAG
|
Protein sequence | MALATGVTAP TTSSSISVGE VSSTTGALNT LAHLPTKKQV FNSTQSVKVI NRRQMATAGP AGGAAQALAV APGINVVTDG PSGAPRSSIS INGMKTGWGN IAGNANDGTV MVTFDGVPMV DPAYGVWQGS ELPQMSMIKG ITATYGPGYP LNRWYNNIGG SVNFSPLQPT RKAGASIGMY YGSFDSKGIH FNVRTGEHDG WSGIIAGGVG SSGNYLNGYG FNNPGNNYAY YGKVRKSFRG GHISFGGYVA RSVAYRPLPI PVTANPNVTI YGVDPNTGAV NPGPIYSQQT TGFYTTLPYS VYWKEAFVKT YLIYSRFEQH LTPSMVIHNL LWYRYGDRVH LHYNNTGNAA NVLNQYYNAS DHTYGDKLYL TVNAPYNNIS LGGYFLNSKY NSLLYFYNQN QIATYDSLSP NAGNNVIING SPVYNSPSLP SAFHSSYLYM TDLAAFVQDV IHPIHGLRIT PGIRVVQFQT NFVNNSAAQF PTSVANLIGH NGDYQPNSST NFTEFEPSIG VNYKVTPNVA LYGNYATGYK APAGATGTYA HELTSTLQPQ KSTQYQIGVK AYVKSYGLLH HAVFNANYYH LNDTNEIIPI PVVNHLYSRF ASGSSVFSGV NLSMDDNPLY NLYLFSNVSF EKATYSNYTT GHGVSYAGLP ISNVPAQTAN IGAYYQIYNS GILYEPRVWW QYTGVQNIYN NNTGAPTSQK LPSFGIFNAS LRVKVSKRYL FAGMHDASVN VTVLNLLNKQ YNNYEYISGG GYYGVAGQIL GEPGMPRAVY LSVNASF
|
| |