| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2548 |
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| Symbol | |
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| ID | 6878547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2519649 |
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| End bp | 2521601 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642790405 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_002220949 |
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| Protein GI | 198284628 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.975526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC CCATGACCAG CCTCATGATC GACCAACTCC GCGCCTGGAC CAGCGCCGGC
TGGCTACGGC CCCTCGACCT TGCCTTCGCG CAGTTCCTCA TCCGCCTGGA CCCGCAGGCC
CCGGCCCTCC TGCCCCTGGC GGGCGCTCTC CTCGCCCGGC TGGAGGGAGA AGGCCACACC
TGCATCGCGC TGGAAGACTT CCTCGGCGCA CCCGAACGCT TCCTGGACTG GCCTGCGCCG
GGGCACGCCA TGCTGGCAAC CGCACTCGGT GACTGGCCCC ATGCCGCCCA ATGGACAGAA
ACCCTCGCCC GGAGCCGCTG CGTACAGGTC ACCGAGCGCA ACGCCCCCGT CCCGGCAAAC
GGCGCAGAAA CGCCCCTGGT CCTCAGTGCC GCCCGCCTCT ATTTGCGCCG CTACTGGCGT
GACCAGCAAT TCATCGCCGA GGCCCTGCGC CAGCGCGCCC AACAGCGCGT CGCCGATGCC
GCCAACCCCG AGGCATTAAG ACCCTGGCTG GAGCAACTTT TCCCGGCGTC TGACGAACCC
GGCGACGCAC TCCCCTGGCA AAAAATCGCC TGCGCCCTCG CCCTGCGCAG CCACTTCAGC
ATCATCACCG GCGGCCCCGG TACCGGCAAA ACCTACACCG CAGCTCGCTT CATGGCCTTG
CTCATGGCGA CCAGCAGCAC ACCCCTGCGC ATCGTGCTTG CCGCCCCCAC CGGCAAGGCC
GCCGTGCGCA TCGACGAATC CCTGCAGAGC GCGGTCGGCA CTCTTCCGCA ATTGAGCCAA
ATACCCGATA TGACTGCCGC CTTCGCCCGC CTGCGTCCGG CGCGCACCCT GCACAGCCTG
CTCGGCGCCC GCCCCGACAG TCGTCGCTTT CGCCACGATG CTGCCAACCC CCTCGAACTG
GACGTACTCG TGGTGGACGA AGCCTCCATG ATTCATCAGG AGATGATGGC CGCCCTGCTC
CGCGCCCTGC CGCCTGCGGC CCGCCTCATC CTCCTCGGCG ATCAGGACCA GCTTGCCTCC
GTCGAAGCGG GCGCGGTGCT GGCCGAACTC AGTCTCGGCA GCGGTAAATA TGATGCCGAG
ACCTGCCACT ATATGCAGGC CAGTTGCGGT GCCGCGCCGC GGCCCGGCGA CAACGGCCCC
AGCCCCCTTG CCGCAAACAT CATCCGCCTG CAACGCAGCC ATCGCTTCAA TGCAGAAATC
GGCGCGCTGG CGGATGCCGT GCATGGCGGC CACCCCGAAA CCGCCGTCCG CATCCTGCAA
ACGGCGCACA CTGGCACTCT CGCCTGGCAA CCCGCCCCTG CCATCCACCG GATACTGGAA
CTGGCCCGCC CGGAAAGCGC CTATGGTCGG GTCTGGCAAG CCGCGGGCCA GCCGCCACCC
AAAGACCGGC AACAACATAG CGCATGGGTT AAAACCATCC TCAACGACTA CGCTGGCTTC
CGCATCCTCT GTGCCCTGCG CCAAGGCCCC TGGGGCGTTA CCGGCATCAA CCGCGCCATC
GAAGACTACC TGCAGCGCCA GGGCATCCTG CAGAGCCGCG GCCTTTGGTA TGCCGGCCGC
CCCACCCTCG TCACCCGCAA TGACCCCAAC CTCGGTCTCA GCAATGGCGA CATCGGCATC
GCCCTGCCCG ACCCGGATAA ACGCCTGCGC GTCTACTTCC CCAATAGCGA AGAGGCCCCC
CGCGCCATCC TCCCCAGCCG CCTCAACCAC ACCGAAAGCG CCTGGGCCAT GACCGTCCAC
AAGGCACAGG GTTCCGAGTT CGCCCACACC GTCCTCATCC TTCCTCCGGA AGACAGCCCC
GTCCTCAGCC GCGAACTGCT CTACACGGCC ATCACCCGCG CCCGCAAATG CTTCACCCTC
ATCGCCCCCC GGGAGCGACT GGAAAACGCC ATTCAGCGCC AGACGCGGAG GATGAGCGGA
TTACACGCGG CGTTATATGA TCCCAGGCGC TGA
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| Protein sequence | MNQPMTSLMI DQLRAWTSAG WLRPLDLAFA QFLIRLDPQA PALLPLAGAL LARLEGEGHT
CIALEDFLGA PERFLDWPAP GHAMLATALG DWPHAAQWTE TLARSRCVQV TERNAPVPAN
GAETPLVLSA ARLYLRRYWR DQQFIAEALR QRAQQRVADA ANPEALRPWL EQLFPASDEP
GDALPWQKIA CALALRSHFS IITGGPGTGK TYTAARFMAL LMATSSTPLR IVLAAPTGKA
AVRIDESLQS AVGTLPQLSQ IPDMTAAFAR LRPARTLHSL LGARPDSRRF RHDAANPLEL
DVLVVDEASM IHQEMMAALL RALPPAARLI LLGDQDQLAS VEAGAVLAEL SLGSGKYDAE
TCHYMQASCG AAPRPGDNGP SPLAANIIRL QRSHRFNAEI GALADAVHGG HPETAVRILQ
TAHTGTLAWQ PAPAIHRILE LARPESAYGR VWQAAGQPPP KDRQQHSAWV KTILNDYAGF
RILCALRQGP WGVTGINRAI EDYLQRQGIL QSRGLWYAGR PTLVTRNDPN LGLSNGDIGI
ALPDPDKRLR VYFPNSEEAP RAILPSRLNH TESAWAMTVH KAQGSEFAHT VLILPPEDSP
VLSRELLYTA ITRARKCFTL IAPRERLENA IQRQTRRMSG LHAALYDPRR
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