Gene Lferr_2537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2537 
Symbol 
ID6878536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2502246 
End bp2503562 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content58% 
IMG OID642790394 
Productvoltage-gated potassium channel 
Protein accessionYP_002220938 
Protein GI198284617 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.863959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAGT TCCGTACGGA CGATGTTTGG GCTGAGAAGT GTCCGGCCTC CGAAAGTAAG 
GGTCTGTCCA TGATCAGAAT CCCCGATGTG ATGAGATGGT CACTGCGACA GCGGTTTTTT
CGCTTCGTGG CCAAGGCGCG TGTGGTATTG AATCTGGATG TCTGGTTTCC ACAGATTCCG
ATGGCGCTGG CCGTTGGGCT GTTGGGGGGG CTGGCGATCC TGAATGCATT GCCGCGCCTG
ACCCGGATCT TTCCGGAGCT TGCAGGCCTT GCCCCCTCCG CCAGCCTGAC CCAGGCCCCG
CTCTTGTCGG CACTGGGCAC GGTACCCGAG GCGATTGTCG GTATCGTCCT GTTGCTGATG
GCCATCGGGT TGTTGTTCCG CTCCCGCTTC TCCTGGGCCA TTACTCTGAT GCTGGCGGCC
GCGATGCTGG CCATGTTGCT GCACCACTAC GGTTTTGTGT GGAGTGGCGT CGTTGCCTAC
AATGCGGCGA TTCTGATGGC TCTGCTGGTG TTCCGGCGCC ATTTTGCGCA TACGAGCGTG
GCTGCGGGAA CCCTGTTTGC GGCGATATCC ATTTTGCTGC TGATGAGTTA CGCGGTGCTG
GGCAGTTACG TGCTGGGCGC GGGCTTTTCG CCGCCCATCA TGAATCTGGT GAATGCCCTG
TATTTCTCCG TGGTTACCAT GTCCACCGTC GGGTATGGAG ATATCGTGCC GAAAAGCGAA
GACGCCCGGA TTTTTGTCAT CTCCATCATC ATCCTGGGCA TCACCGTTTT CGCAACCTCT
ATTTCCGCGG TTGTGGTACC GCTGGTAAAC GGCAGGATGC AGCGTCTGCT CATGGGAGAG
AAGCGGCGCA GTCACCGTAG TCACTATCTG ATCATCGGGG ATAACGCACT GGCCCAGAAT
ACCTACCGCG CGCTGCGCGC CAGGCATTTG TCGGCACTGG TGCTGGTGCC CGTGCACCCG
GAGCGACTCT GGATGGCCAC GGAAGATCTC ATGATCGGTG ATGCAACGGA CCTGGATGTA
TTGCGTAGGG CGGGAGCCCA GTATGCCCTG GGAGTGCTCG CATTGCGGGC GAATGACAGT
GAAAATGCCT TTATCATTCT CGCGGCGAGA GAGTTGGGTG TTTCCGGGAA AACCGTGGCG
GCGGTTCAGA ACGCCAAGCA TCTGGAACGT CTGCGACAGA TCGGGGTCGA CCTCATCATC
TCTCCGGAAG TGTTGGGCGG GGAACTGCTG GCGCTGGCCC TGAGCGGTGA GAATCTGGCA
GGAGATGTCA TTATCCATAA ATTGTTTACC GCGAAGGCGG AAGGAGCTGA GATTTGA
 
Protein sequence
MLQFRTDDVW AEKCPASESK GLSMIRIPDV MRWSLRQRFF RFVAKARVVL NLDVWFPQIP 
MALAVGLLGG LAILNALPRL TRIFPELAGL APSASLTQAP LLSALGTVPE AIVGIVLLLM
AIGLLFRSRF SWAITLMLAA AMLAMLLHHY GFVWSGVVAY NAAILMALLV FRRHFAHTSV
AAGTLFAAIS ILLLMSYAVL GSYVLGAGFS PPIMNLVNAL YFSVVTMSTV GYGDIVPKSE
DARIFVISII ILGITVFATS ISAVVVPLVN GRMQRLLMGE KRRSHRSHYL IIGDNALAQN
TYRALRARHL SALVLVPVHP ERLWMATEDL MIGDATDLDV LRRAGAQYAL GVLALRANDS
ENAFIILAAR ELGVSGKTVA AVQNAKHLER LRQIGVDLII SPEVLGGELL ALALSGENLA
GDVIIHKLFT AKAEGAEI