Gene Lferr_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2529 
Symbol 
ID6878528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2495812 
End bp2496984 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content59% 
IMG OID642790386 
Producthypothetical protein 
Protein accessionYP_002220930 
Protein GI198284609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTT CCAAAAGGAG TTATGGTCAT AAAATCATTC CGCTGACTGT ACTCGCCCTA 
TCGCCGCTGG CGATCGGGAC TGGTCATGCA TCACCTCTGG CATTGCCCAG CCCCCTGACC
TTCCAGGCCG GCCCTTTGGG CACGCTGAAC GTGCAGGGCG TGGCCAGCGG CTACGCCGTC
TGGCAGGACA ACAAGTTCGC AGGATCAGGC AATCCCGGCA ACAAATCTGC GTCCGCCGAC
ATCAGCAACG GTCAGGTGAT CATCCAGAAG AACTCCGGTC TGGTGCAGTT CTATCTGCAG
GCAGGGGCCT ATAACGTCAT GAGCCTCGGG TCCAATTTTG TCTCCACCGG CACCTTCACC
CAGAACACCT TCGGTGCCCT GCCCGTCGGT TATCTCGAAA TTGCCCCCAC CGATAACTTC
AATGTCCAGA TCGGCAAACT CCCGACCCTG ATCGGCGCGG AATACACCTT CAGCTACCAG
AACTGGAACA TTGAGCGCGG CCTGCTCTGG GGCCAGGAGA ATGCCGTCAA CAAGGGCATC
CAGGCCAATT ACACCATGGG GCCGGTCACC GCCTCGGTAT CCTGGAATGA CGGCTTCTAC
TCGAATCGCT TCAACTGGAT GACCGGCATG TTGACCTGGG CGATCAACAA ACAGAACAGC
GTGTTCTTCC AAGGTGGCGG GAATCTGGGA CAGACCGATT ATGCCTACTC CTCCATCGCC
ACTACACCGC TGCAGAATAA CGAAAGCATC TTCGACGTGG GTTACACCTA CACGGGCGCA
AACCTCGTCG TTACGCCCTA CGTGCAGTAT ACCAGCGTAC CGGCCAGCGC CATTCAGGCG
CTGGGTGCCG GCACCAGAAA GACCAGCACC CTCGGGGCCG CCATTCTTGC CGATTACAGC
CTGACGGACA AAATATCCAT CGCCGGGCGG GTGGAATACA TCAGCAACTC CGGCAACCCC
AACGATGGCG CCGCCAACCT CACCGGCTTC GGCCCCGGTT CCCATGCCTG GTCGCTGACC
GTGACACCGA CTTACCAGGA CGGCGGCTTT TTCGCTCGGG CTGAGCTTTC TTATGTTACC
GCGTCCATGC AGAGCGGCAC TGGTTTCTCG GGTAGCAACA GCCTCGCCCA GAACCAACTC
CGGGGCATGG TCGAAACCGG CTTCATGTTC TAA
 
Protein sequence
MKSSKRSYGH KIIPLTVLAL SPLAIGTGHA SPLALPSPLT FQAGPLGTLN VQGVASGYAV 
WQDNKFAGSG NPGNKSASAD ISNGQVIIQK NSGLVQFYLQ AGAYNVMSLG SNFVSTGTFT
QNTFGALPVG YLEIAPTDNF NVQIGKLPTL IGAEYTFSYQ NWNIERGLLW GQENAVNKGI
QANYTMGPVT ASVSWNDGFY SNRFNWMTGM LTWAINKQNS VFFQGGGNLG QTDYAYSSIA
TTPLQNNESI FDVGYTYTGA NLVVTPYVQY TSVPASAIQA LGAGTRKTST LGAAILADYS
LTDKISIAGR VEYISNSGNP NDGAANLTGF GPGSHAWSLT VTPTYQDGGF FARAELSYVT
ASMQSGTGFS GSNSLAQNQL RGMVETGFMF