| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2524 |
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| Symbol | |
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| ID | 6878523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2485405 |
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| End bp | 2488767 |
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| Gene Length | 3363 bp |
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| Protein Length | 1120 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642790381 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_002220925 |
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| Protein GI | 198284604 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCC ATGTCGTACT GCGACACCAG ACCGTGTATG ACTTTGACCG GCTGGTGGAT
ATCCACCCCC ATGTGCTGCG CCTGCGCCCT GCGCCCCATT GTCGCACCCC GATCCTGGCC
TACTCGCTCC ATGTCGAACC GGCCAGGCAT TTTCTCAACT GGCAACAGGA CCCATTCGGC
AACTACCAGG CGCGCCTGGT CTTTCCCGAG CGCGCGCGCT CGCTGAAGGT GGAGGTAGAG
GTCATCGCCG ATTTGACCGT GATCGACCCT TTTGATTTCT TTATAGAGCC CGAGGCCGAA
CACTGGCCTT TCCCCTATGA TCCCATCCTC CGCAAGGAAC TCGCACCCTA CCTGGAACAG
GAAGAGGCCG GCCCGTTGCT ACGGCGTTTT CTGCTCGATA TCCACCGCCA GCGCCAGCGT
ACCGTGGATT TTCTCGTGGC CATCAATCAA CGCCTCCAGG GACAGATCGG CTATACCCTG
CGAATGGAGG CCGGGGTGCA GACACCGGAG GAGACCCTGA AAAAGGCCAG TGGCTCCTGC
CGCGACAGCG CCTGGCTGAT GGTGCAGGTA CTCCGCCACA TGGGGCTCGC GGCTCGCTTC
GTGTCCGGCT ATCTGGTGCA ACTGGTGGCC GATCAGGCGC CCCTGGACGG ACCCGCAGGC
CCCGCCAGCG ATTTCACTGA TCTCCATGCC TGGGCAGAAG TTTATGTCCC CGGCGCCGGC
TGGATCGGTC TCGACCCGAC CTCCGGACTG TTTGCCGGGG AGGGCCACAT CCCGCTGGCC
TGTACCCCGC ATTATAAAAG CGCGGCCCCC ATTACCGGCG CCACCGGTGC CTGCGAGGCC
GGGTTTCACT TCACCAACAC CGTGACCCGC CTGCTGGAAA CGCCCCGCGT CACCAAGCCG
TACACCGACG GGCAATGGGA ACAGATCATG GGCCTGGGCG ATGCGCTGGA TAAGCGTTTA
CAGGCCGCCG ACATGCGCCT CACCATGGGC GGCGAACCAA CCTTCGTCGC CGCTGAAGGA
GTGGATGCCG CCGAATGGAA TCAGGACGCC CTCGGCATGC ATAAGCGGGA ACGCGCCGAA
ACGCTGGTGC GTCGCCTCGG CCAGCGCTTC GCGCCCGGTG CATTGCTGCA CACGGGCGAA
GGCAAATGGT ATCCCGGCGA ACCGCTGCCG CGTTGGGCGC TTGGTCTGTA CTGGCGCAAG
GATGGTATCC CCCTGTGGCG CGAGCCCCGG CTGCTCGCCG AGCCGCTGCA CGACTACGGC
TGGCAGGCCG ATGACATCCA CAGTTTCGCC TGTACCCTGA CCCGCCATCT GCAGCTCGAC
AGCAACCGCC TGCTGCCCGC TTACGAGGAC GCCTGGCATA TCCTGCATCA GGAAGGCCGC
ACCCCGGTTA ATATCGATCT CAGCACCCAT CGCCTCGACG ACCCGCTGGA ACGCCAGGCG
CTGATCGGCA AATTGCAGGC GGGACTCGAT CAGCCGGTGG GCTGGGTACT GCCCCTCGCC
TGGGAATGGA AACAGCAGCG CTGGTACTCG GCGCCGTGGA GTTTCCGGAG CGGGCGGCTG
GTTCTGCTGC CTGGCGACTC CCCGCTGGGC ATGCGTCTGC CCCTTGACAG CCTGCCCTGG
GTGGTCGAAG CCCACAAAAA GTGGCAGCCG GAGACTGACC CCTTCGCGCC CATGCCACCA
TTGCCGGATA TCCACGGCGA GATCACCGCG CGCAACAGCC ACGTCCCTGA AGCGCAGCCA
TCGTCCAAGA CGGACCGGCG ACTCTGGGAG GAGATCCCCC ATACCGCAGT CACCCTGGAA
ATCCGCAAGG GTTGCCTGTA CTGCTTCTTT CCGCCCTTGC AGGTGATGGA ACACTATCTG
TACCTGCTCG GCGCGGTCGA ACATAGCGCC ACCGAACTCA ATATGCCGGT GGTCATCGAG
GGTTATGCGC CGCCCAGCGA TCCACGGGTG GAGAAGCTGC TCGTCACCCC CGACCCTGGG
GTCATCGAGG TCAATATCCA TCCTTCCACG CACTGGCAGG AGATGGTGAA AAAGACCACG
GCCCTCTATG ACGACGCCCA CGCCTGCCGA CTGACCGCCG AAAAATTCAT GCTGGATGGG
CGCCATACCG GCACCGGCGG CGGCAATCAC CTGACACTCG GCGGCGCCAC CCCCGGCGAC
AGTCCCTTTT TGCGCCGCCC CGATCTGCTG CAGAGCCTCG TCACCTACTG GCAGCATCAC
CCGGCCCTGT CCTATTTTTT CAGCGGCATG TTTATCGGCC CCACCAGTCA GTCGCCGCGG
GTGGATGAGG CGCGCCATGA GGCCCTTTAC GAGCTGGAGA TCGCTTTTGC TCAGGTGCCG
CCCGGCATCG TGCCGCAGCC ATGGCTGGTG GACCGTCTCT TCCGCAATCT GCTGGTGGAC
ATCACCGGCA ACACCCACCG CGCCGAAATC TGCATCGACA AGCTCTATTC GCCGGTCGGG
GCCGCCGGCA GGCAGGGGCT GGTGGAACTG CGAGCCTTCG AGATGCCGCC CCACGCACGC
ATGAGCCTCG CGCAGCAACT GCTGGTGCGC AGCCTCTTGC TGCGTTTCTG GGAAACCCCC
TATCGTCATG AACTGGTGCG CTGGGGCACC GCCCTCCACG ATCGCTTCAT GTTACCCCAT
TATATCTGGG AAGACCTGCG CGAGATTTGC GCGGACCTGC AGGAACACGA TATTCCCTTC
CATCTCGACT GGCTGGCGCC CTTCTCCGAG TTTCGCTTTC CACGATACGG TCACATCCGG
ATCGGCGAGA TCGACATTGA ACTGCGCGCC GCCATCGAAC CCTGGCACGT TCTCGGCGAA
GAGATGACGG ATAGCGGCAC GGCGCGCTAT GTGGACTCAT CGGTCGAACG GCTGCAGGTG
CGGGTAACGG GCATGACTCC GGGACGCCAT GTACTCGCCT GCAACGGACG ACGGGTGCCA
CTGCAGGCCA CTCGTGCGCA CGATGCGCAG GTAGCCGGGG TACGTTACCG CGCCTGGCAA
CCGCCATCCG CGCTGCACCC CACCATTCCG GTGCATACGC CGCTGACTTT TGACCTGATC
GACACCTGGA ACGGGCGTAG CGTGGGCGGT TGCAGCTACC ACGTCATGCA TCCCGGCGGG
CGCAATCCCG AAGCCTTCCC GGTCAATGCC TGGGAAGCAG AGGCGCGGCG CCAGAGCCGC
TTCACCACGA CCGGCCACAG TCAGGGCCCG CATCCGGAGC CAATCCTGCA GGGTCCGGGC
GCGAGCCTTT TCGTGCCAAC CGGCAGCGGT GAGCACGCCT GGCTGCCCCC CCATGCGGAA
GATCAACCTG ACTATCCCCA TACCCTGGAC CTACGCATGG CGCGGCCCAT GGCCTCAGGC
TGA
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| Protein sequence | MGIHVVLRHQ TVYDFDRLVD IHPHVLRLRP APHCRTPILA YSLHVEPARH FLNWQQDPFG
NYQARLVFPE RARSLKVEVE VIADLTVIDP FDFFIEPEAE HWPFPYDPIL RKELAPYLEQ
EEAGPLLRRF LLDIHRQRQR TVDFLVAINQ RLQGQIGYTL RMEAGVQTPE ETLKKASGSC
RDSAWLMVQV LRHMGLAARF VSGYLVQLVA DQAPLDGPAG PASDFTDLHA WAEVYVPGAG
WIGLDPTSGL FAGEGHIPLA CTPHYKSAAP ITGATGACEA GFHFTNTVTR LLETPRVTKP
YTDGQWEQIM GLGDALDKRL QAADMRLTMG GEPTFVAAEG VDAAEWNQDA LGMHKRERAE
TLVRRLGQRF APGALLHTGE GKWYPGEPLP RWALGLYWRK DGIPLWREPR LLAEPLHDYG
WQADDIHSFA CTLTRHLQLD SNRLLPAYED AWHILHQEGR TPVNIDLSTH RLDDPLERQA
LIGKLQAGLD QPVGWVLPLA WEWKQQRWYS APWSFRSGRL VLLPGDSPLG MRLPLDSLPW
VVEAHKKWQP ETDPFAPMPP LPDIHGEITA RNSHVPEAQP SSKTDRRLWE EIPHTAVTLE
IRKGCLYCFF PPLQVMEHYL YLLGAVEHSA TELNMPVVIE GYAPPSDPRV EKLLVTPDPG
VIEVNIHPST HWQEMVKKTT ALYDDAHACR LTAEKFMLDG RHTGTGGGNH LTLGGATPGD
SPFLRRPDLL QSLVTYWQHH PALSYFFSGM FIGPTSQSPR VDEARHEALY ELEIAFAQVP
PGIVPQPWLV DRLFRNLLVD ITGNTHRAEI CIDKLYSPVG AAGRQGLVEL RAFEMPPHAR
MSLAQQLLVR SLLLRFWETP YRHELVRWGT ALHDRFMLPH YIWEDLREIC ADLQEHDIPF
HLDWLAPFSE FRFPRYGHIR IGEIDIELRA AIEPWHVLGE EMTDSGTARY VDSSVERLQV
RVTGMTPGRH VLACNGRRVP LQATRAHDAQ VAGVRYRAWQ PPSALHPTIP VHTPLTFDLI
DTWNGRSVGG CSYHVMHPGG RNPEAFPVNA WEAEARRQSR FTTTGHSQGP HPEPILQGPG
ASLFVPTGSG EHAWLPPHAE DQPDYPHTLD LRMARPMASG
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