| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2522 |
|---|
| Symbol | |
|---|
| ID | 6878521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2482931 |
|---|
| End bp | 2484394 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642790379 |
|---|
| Product | protein of unknown function DUF404 |
|---|
| Protein accession | YP_002220923 |
|---|
| Protein GI | 198284602 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGC TGAGCAAGCA TTATCAACAG CAGAAGGGTT ACGATGAGCT GGTAGGCGAA
GGTGCGGTAC CACGTCTGCC CGCAGCCCCC CTGTTTGACT ACCTCAGCAC CCTGGACAGC
AGTGAACTGC GTGCCCGCCG ACAGGCCGCA GATGCCGCCA TCCTCGCCAT GGGCATCACC
TTCACGGTGT ACAGCGAGGC GGGCGACATC GACCGCGCCT GGCCCTTTGA TATCATTCCC
CGCATCCTCT CCCGGCGAGA GTGGATGCGC ATCGAAGAAG GGCTCAAGCA GCGTTTACAA
GCCCTCAACC TCTTTATCGA CGACATCTAT AACGCACAGC GTATCGTTGT GGACGGTGTT
TTCCCGGCCG AGGTCCTGGC CAGTTCCCGC AATTTCCGGG AGGCCTGCCG CGGCGTGCAT
CCACCTTTCG GAGTCTGGGC ACACATCTGT GGGAGCGATC TGGTCCGCGA TGCGGACGGC
ACGGTCTATG TTCTGGAGGA CAACCTGCGG GTTCCCTCCG GCGTCTCCTA CATGCTGGAA
AATCGACAGA TCATGAAGCG GCTCTTTCCT GAACTATTCA AGTCCTCGAC TATCCTGCCC
GTGGACGACT ACCCCAACCG GCTCTACGAC ACCCTGGCCG CACTGTCGCC ACGCGAGGGT
GAGCGGCCCG TGGTCGCCGT GCTTACCCCG GGCATCTACA ACTCGGCCTA CTTCGAGCAC
AGTTATCTGG CGCAGCAAAT GGGGGCTTAT CTGGCGGAGG GCGCGGATTT CTTCGTCAGC
AGGGACGATA TCGTCTATCT CCGGACCATC TCCGGCCCAC AGCGGGTGGA TGTGATCTAC
CGCCGCATCG ACGACGAATA TATGGACCCC GAGGTCTTCT TCACCGATTC CGCTCTGGGT
ATTCCCGGAT TGCTGCGCGC CTGGCGACGC GGCACGGTCG CCATTGCCAA CGCACCCGGT
GCCGGCGTCG CCGATGACAA GGTGGTATAC GCCTTCGTGC CCGACATCAT CCGCTACTAT
CTGGGCGCCG AACCCATCCT GCCCAACGTG CCGACCTACT TGTGCATGCG CGAGGCAGAC
CGCGATTATG TACTGAGTCA CCTGCACGAA CTGGTGGTCA AGCCGGCCAA CGAGTCAGGC
GGTTACGGCA TGCTCATCGG ACCGCGCGCC ACATCCGAAG AGCGTGGGCG CTTCGCGGAA
CTGATCGCCG CCAACCCGCG TAATTATATC GCCCAGCCCA CCTTGAATCT TTCCACCGCG
CCAACCCTGG TGGAAGACCA TCTGGAAGCC CGCCATCTCG ACCTGCGTCC CTTTATCCTG
CAGGCGGACA AGCTGTATGT GACCACCGGT GGCCTGACCC GGGTGGCCAT GCAACCGGGG
TCGCTGGTGG TGAACAGCTC CCAGGGCGGC GGCAGCAAAG ACACCTGGAT TGTCGATGAG
GAGGCCCCAT GCTTTCGCGC GTAG
|
|---|
| Protein sequence | MDWLSKHYQQ QKGYDELVGE GAVPRLPAAP LFDYLSTLDS SELRARRQAA DAAILAMGIT
FTVYSEAGDI DRAWPFDIIP RILSRREWMR IEEGLKQRLQ ALNLFIDDIY NAQRIVVDGV
FPAEVLASSR NFREACRGVH PPFGVWAHIC GSDLVRDADG TVYVLEDNLR VPSGVSYMLE
NRQIMKRLFP ELFKSSTILP VDDYPNRLYD TLAALSPREG ERPVVAVLTP GIYNSAYFEH
SYLAQQMGAY LAEGADFFVS RDDIVYLRTI SGPQRVDVIY RRIDDEYMDP EVFFTDSALG
IPGLLRAWRR GTVAIANAPG AGVADDKVVY AFVPDIIRYY LGAEPILPNV PTYLCMREAD
RDYVLSHLHE LVVKPANESG GYGMLIGPRA TSEERGRFAE LIAANPRNYI AQPTLNLSTA
PTLVEDHLEA RHLDLRPFIL QADKLYVTTG GLTRVAMQPG SLVVNSSQGG GSKDTWIVDE
EAPCFRA
|
|---|
| |