Gene Lferr_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2503 
Symbol 
ID6878501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2465717 
End bp2466787 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content50% 
IMG OID642790359 
ProductCholoylglycine hydrolase 
Protein accessionYP_002220904 
Protein GI198284583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3049] Penicillin V acylase and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAA GCCTGCAGAG GGTCGTCTTT GGTGTAGCCG CCACACTGCT CTCGACCGTC 
ACTGCTGCAG ATGCCTGCAC CCGCGTCGTA TACCACGGCA ATGACGGGCT GGTGATCACC
GGTCGAACCA TGGACTGGAA GGAACCCATG CATTCACGTT TGTGGATTTT CCCTCGAGGC
CTGTCCTATG ATGGGGGAGC TGGTCCCAAC TCCATCCGCT GGACCTCTAA ATACGGAAGT
GTCGTGGTGA CATCAATGGA CTCTGCCGTG AGCGACGGCA TGAACCAGAA AGGACTGGTT
GCCAATATGC TCTGGTTAGC CGGTAGCAAG TATCCGGATG ACTGTGGTAA TGAGCCACGT
CTGAGCTTGG CCGCCTGGGC ACAATATTTT CTGGATAATT TTGCCACGGT CAAGGAAGCA
GTTGCGGCGT TTAAGTCTCA TCCATTTTGC GTTGTTTCAG ACCGCATGCC GGGAAGCAAT
CGTTATACAA CGCTACATCT ATCCTTATCT GACGCACAGG GTAATAGCGC TATTTTTGAA
TATATCAATG GCAAGGTCGT CATTCATGAA GGTCGCGATT ACCAGGTTAT GACTAATGAC
CCAGAATATT CTGAACAATT GGCTATTCAG AAATACTGGA GCCAGATTGG CGGAACCACA
TTCTTGCCAG GGACCAATCG TCCTGCCGAT CGCTTCGCCA GAGCAGCCTT TTATATTCAC
GCCATTCCCA AAACTGCCCA TCAATTGCAA GGTGTGGCAG AAGTCATGAG TGTTTTGAAC
AATATTTCCG TACCCATAGG CATTTCGACA CCAGATCAGC CGCACATTTC TTCTACCCGA
TGGCGCGTAG TGGCGGACCA GACGGGGTTG CGCTACTATT ACAATTCTGT TACTAGCATG
AGTACTTTCT GGGTGGATCT GAATAAAGCA GACCTGAAAA AAGGAGCTCC TATCCTACAA
TTACCGATGG GAAATAGCCA GGTTTATTCA GGAGATGTGA CGGCAGATTT TAAGCCGGCC
CCTCACCACT TTGAGTTTGC CACAGTACCA CAAGAAAAAT CGGACCAATA G
 
Protein sequence
MRISLQRVVF GVAATLLSTV TAADACTRVV YHGNDGLVIT GRTMDWKEPM HSRLWIFPRG 
LSYDGGAGPN SIRWTSKYGS VVVTSMDSAV SDGMNQKGLV ANMLWLAGSK YPDDCGNEPR
LSLAAWAQYF LDNFATVKEA VAAFKSHPFC VVSDRMPGSN RYTTLHLSLS DAQGNSAIFE
YINGKVVIHE GRDYQVMTND PEYSEQLAIQ KYWSQIGGTT FLPGTNRPAD RFARAAFYIH
AIPKTAHQLQ GVAEVMSVLN NISVPIGIST PDQPHISSTR WRVVADQTGL RYYYNSVTSM
STFWVDLNKA DLKKGAPILQ LPMGNSQVYS GDVTADFKPA PHHFEFATVP QEKSDQ