| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2497 |
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| Symbol | |
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| ID | 6878495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 2459868 |
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| End bp | 2462087 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642790353 |
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| Product | DNA topoisomerase type IA zn finger domain protein |
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| Protein accession | YP_002220898 |
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| Protein GI | 198284577 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCG CCAAGCTGTT CGTAGGTAGC CACGAACTGC ACATTGAAAA GCGCATCGGC
AAAGGCGGCG AAGGAGAGGT GTTCGCCATC AGCAATATGC CGGGTTTTGC GGTGAAGACC
TATCTGCCCG GCATCGTCGC AGAACGCGAA AAGAAAATTC GCGCAATGGT CAGCACACGA
CTTGCCGACA ACGCGCCTCT CGTCGCCTTT CCCCACCAGA TCGCCGTTGA CGGGCGTGGA
ACCTTTGTCG GATTCGTAAT GCGCCTTGTC GAGAAGCACA AGGAAATCCA CGAGCTTCAA
ACTCCGTCGT CACGGCAAAA GCATTTCCCC AAAGCAGATT ATGCCTTCAT TGTGCGCGTC
GCGCTAAATA TCGCCCGCGT GTTCGCACAA GTCCATGCCA CGGGCTGCGT GGTTGGCGAC
ATTAATCAGC GTGGGATTCT CGTATCCCCA ACTGCTACCG TTGCGCTGAT CGACGCCGAC
AGCTTTCAGG TTAGCGACGG CGCGCAACGC TATCTGTGCG TCGTCGGCGT TCCCGAATAC
ACGCCTCCCG AATTGCAGGG GAAATCCCTG AAAACCATCG TTCGTACCAC TGACCACGAT
GCTTTCGGGC TGGCTGTGTG CCTATTCCAG CTACTTTGCA TGGACCGGCA TCCGTTTTCT
GGCCGATTTA CGGGCCATGG GGACATGCCG CTGGAAAAGG CCATCTTGGA ATACCGCTTC
GCCTATTCCT CCCGAAACAC TGGCATGATT CCGCCTCCTG GCACCGTTCG GCTTGATGAC
TTTACCCCGA AGATCGCCAG CTATTTTGAG TTGGCCTTCT CTCCCAGCCA TGTCGGGAAA
CGCCCGTCCG CGCCAGCATG GGTTGAAGCT CTTGGCGAAC TGGAATCCGC CTTGCGGGTT
TGCAGCCGCA ATAAACTCCA TCGCTATGCC CGGAACGCCA AGGAATGTCC GTGGTGCCGG
ATGGAAAACG AATATGGCCG CCCCCTGTTT CTGGATACGG ACCTCACCAA CGTCCACGTC
CCGAATGGTC GTCTGGACCT GGCGGCAGGG CTTGTCTTGG ACATTCCTGC GCTCCTCTCT
GCGATCAACG GCGTCGCCAT CCCGTCCTCC ATATCCATCC CCATCCCTCA GGTGCCGGGC
ACGCCCAAGC CAAGTCGGGG GGCAAGCGAA GCTCGGTCAA AAAAGAGGTT CGCCCCGCTC
TCCAGAATTG CCGGGGTCGG CATCATGTTC GGCGCAGCCT ATGCGTTCGC ATCCGATGTC
CCCGTTCTTA TCGCTCTGGG CATCGCCGGT TTCGGCGGCT GGCTTATGTT CCGCTCATCC
TCCCCGGCAG ATGGTTTGCT GGCAGAACAT CGAAAAGCCA CCAATGCCGT ATCATCGCAT
ATTGAGCAGC TTCAACGTAC AAGTCCCATT GAGCAAGTGT TGCGGAAGAA GGCGGAGGCG
CTGGATGCCA TTGACGAGTT CAAGCAACTC GCATCGGCCT TCAGAAACAT CCGAAGCGAG
TATGAGAAAC ACAGGCGGCA GAAGCAGCTA GACGATCACC TCTCACAATT TCCTATCCGG
CGCGCGCGCA TCCCCAAGGT TAGTTCTGGT GATATTGCCC AACTCGCGTC CTACGGTTTC
ACTACTGCGT TCGACGCAAG GCGGCGCGAC GTGCAGCAGG TCCGCGGCAT CGGCCCGGTC
AAGGCTTCCA ACATCGCTGC ATGGATTCGG CGTGCGGAGG CCAAATTCCA ATTTCAGAGC
GCCTATACGC CAGAAGATCA GCGCGATATC CAGAAAGCGC AGAATGAAAT CATCACGAAG
CAGCAGGGTC TTGAGGAGCG CCTCAAGAGG TTGGTCGGTG AGTTTCGTCA GGAAGCGCAG
GGCTTTGAAC GATGGAAAAC AAGCCACGAT CCTGAATTGA CTCGGCTAGC CCAGCAACTC
GCCCAAGCGG AAGCAGACCT GTCGCACCTA GGGGTTCCGG TGCCCTCCCG ACCCAATGTT
ACGCCGCTGC CGGTGCTCCC GGTTTCAACA TTTCAGCGCG GCGGGCGGCC AACAAACTTC
GGAGCGACAT CCATCGCCGG GACGCAGGCT ACTCCCTCTC CGACCCAACC GCATGCGGTC
ACTTGCCCAC AATGCGGTAG CCGGATGGTG CGACGGACCG CCCGCAGAGG CTCCCGCGCA
GGCAGGCCAT TTTGGGGTTG TTCACGCTAT CCAAGCTGCA CGGGAACCCG GCCAATCTAG
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| Protein sequence | MKTAKLFVGS HELHIEKRIG KGGEGEVFAI SNMPGFAVKT YLPGIVAERE KKIRAMVSTR
LADNAPLVAF PHQIAVDGRG TFVGFVMRLV EKHKEIHELQ TPSSRQKHFP KADYAFIVRV
ALNIARVFAQ VHATGCVVGD INQRGILVSP TATVALIDAD SFQVSDGAQR YLCVVGVPEY
TPPELQGKSL KTIVRTTDHD AFGLAVCLFQ LLCMDRHPFS GRFTGHGDMP LEKAILEYRF
AYSSRNTGMI PPPGTVRLDD FTPKIASYFE LAFSPSHVGK RPSAPAWVEA LGELESALRV
CSRNKLHRYA RNAKECPWCR MENEYGRPLF LDTDLTNVHV PNGRLDLAAG LVLDIPALLS
AINGVAIPSS ISIPIPQVPG TPKPSRGASE ARSKKRFAPL SRIAGVGIMF GAAYAFASDV
PVLIALGIAG FGGWLMFRSS SPADGLLAEH RKATNAVSSH IEQLQRTSPI EQVLRKKAEA
LDAIDEFKQL ASAFRNIRSE YEKHRRQKQL DDHLSQFPIR RARIPKVSSG DIAQLASYGF
TTAFDARRRD VQQVRGIGPV KASNIAAWIR RAEAKFQFQS AYTPEDQRDI QKAQNEIITK
QQGLEERLKR LVGEFRQEAQ GFERWKTSHD PELTRLAQQL AQAEADLSHL GVPVPSRPNV
TPLPVLPVST FQRGGRPTNF GATSIAGTQA TPSPTQPHAV TCPQCGSRMV RRTARRGSRA
GRPFWGCSRY PSCTGTRPI
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