Gene Lferr_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2490 
Symbol 
ID6878488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2453553 
End bp2453999 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID642790347 
Productglycine cleavage H-protein 
Protein accessionYP_002220892 
Protein GI198284571 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT TTCAAGGCTG TCAGTTGCCG GAAGACCTCC ATTATGATCT GGACTATGTC 
TGGGCACGTC CCGAAGAGGA TGGCACCTTC ACCATCGGCG TCACCGATCC GGCCCAGACG
ATGTCGGGGC GCTTGCAAAA GGCCCGCATC AAAAAGGTGG GCACCCACCT GGAGGCCGGT
CGACACGTGG CCACCCTGGA GAGCGGCAAA TGGGCCGGCG GCGTGCCGGT GCCTTTTGCC
GGGTCGGTGG TAGCGCGCAA CGACACATTG CTGGAAAATC CCCATCTCAT CAACATCGAC
CCCTACGGCG ATGCCTGGAT CGCACGGGTG CGGCCTGATG ATCCGGCCAC GGCCCTGGAG
CGCCTCCATA CCGGGCCGGA TGCCGTCGCG GCGCTCCAGG CCTGGATCAA GCGCTACGAC
GTGCAATGCA TGCGCTGTTC CGACTAA
 
Protein sequence
MSEFQGCQLP EDLHYDLDYV WARPEEDGTF TIGVTDPAQT MSGRLQKARI KKVGTHLEAG 
RHVATLESGK WAGGVPVPFA GSVVARNDTL LENPHLINID PYGDAWIARV RPDDPATALE
RLHTGPDAVA ALQAWIKRYD VQCMRCSD