Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2484 |
Symbol | |
ID | 6878482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2449680 |
End bp | 2450795 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642790341 |
Product | ABC-2 type transporter |
Protein accession | YP_002220886 |
Protein GI | 198284565 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC AACGCCTGCG CGGACTGATC CGCAAGGAAT TCATCCAGAT CCTGCGCGAC CCTTCAGCCA TCGCCATCGC CTTTTTCATG CCCGTATTTC TGCTGTTTCT GTTTGGCTAC GGTGTATCTC TGGATGCCAA GCACGTGCCG GTCGCCGTCG TAGTGGACCA ACCGACGGCG GAAACCAGTG CCTTCGTGGG CGGCTTGCAA CAGTCCCGCT ATTTCGAGCC ACAGATATAC ACCAGCATGC ACAGTGCCCG GCAGGCACTG ATGGCACGCA AGGCCGATGG CATCCTCTGG CTACGCTCGG ACTTCAGCCG CCAGATACTA CGGGGAAATA CCGCCTCCAT CGGTGTTCTG ATCAACGGGG TAGATGCCAA CAATGCGCGC ATTCTGGAGG GCTATATGCA GGGCATCTGG CAGAACTGGC TGCAACAGCG CGCGTTCAAC GCCGGAGCCC CGCTGATCAT CCCGGTGAAC GGCGAAGACC GCATCTGGTT CAATCCCGCC CTGCGCAGCC GGGACTATCT GGTGCCGGGT CTGATCGCGG TGATCATGAC CCTCATTGGC GCCTTGCTGA CCGCCTTGGT GGTAGCCCGT GAGTGGGAAC GCGGCACCAT GGAGGCCCTC ATGGCCACTC CGGTCACCAT GAGCGAGATT CTGCTGGGCA AACTGATTCC GTATTTTATC ATGGGCATGG GCGGCATGCT GCTCTCCGTG GCACTGGCCG TCTGGCTTTT CACCGTCCCC CTGGTCGGTA GTTTCTGGGT GCTGCTCGCC TGCTCGGCGC TCTTTCTGCT GACGGCGCTG GGCATGGGGT TGCTGATTTC CAGTGTCGCC CGCAATCAGT TTGTGGCCGG GCAGATCGCC ATCATCGTCA CCTTTCTGCC CGCCTTTATT CTTTCGGGCT TCATCTTCGA TATCCAGTCG ATGCCGGCGG CCATCCGCAT CATCACCCAT ATTGTCGCCG CCCGCTATTT CGTGAGTATC CTGCAGACCA TCTTCCTCGC CGGGGACGTC TGGCCCATCA TTCTCTGGAA CAGTCTGGCG CTGCTGCTGA TGGCGGCGTT TTTCCTCGGC GTCACCTTGC GTCGTTCACA CAAGAGGCTG GACTGA
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Protein sequence | MNLQRLRGLI RKEFIQILRD PSAIAIAFFM PVFLLFLFGY GVSLDAKHVP VAVVVDQPTA ETSAFVGGLQ QSRYFEPQIY TSMHSARQAL MARKADGILW LRSDFSRQIL RGNTASIGVL INGVDANNAR ILEGYMQGIW QNWLQQRAFN AGAPLIIPVN GEDRIWFNPA LRSRDYLVPG LIAVIMTLIG ALLTALVVAR EWERGTMEAL MATPVTMSEI LLGKLIPYFI MGMGGMLLSV ALAVWLFTVP LVGSFWVLLA CSALFLLTAL GMGLLISSVA RNQFVAGQIA IIVTFLPAFI LSGFIFDIQS MPAAIRIITH IVAARYFVSI LQTIFLAGDV WPIILWNSLA LLLMAAFFLG VTLRRSHKRL D
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